Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBE2E3Q969T4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 AC034268.1-201ENST00000441047 882 ntBASIC20.02■□□□□ 0.8
UBE2E3Q969T4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 MIR6821-201ENST00000617625 74 ntBASIC20.02■□□□□ 0.8
UBE2E3Q969T4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
UBE2E3Q969T4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2E3Q969T4 AC004854.2-201ENST00000608450 1441 ntBASIC20.02■□□□□ 0.79
UBE2E3Q969T4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
UBE2E3Q969T4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBE2E3Q969T4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 AC245052.3-201ENST00000450182 901 ntBASIC20.01■□□□□ 0.79
UBE2E3Q969T4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBE2E3Q969T4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20■□□□□ 0.79
UBE2E3Q969T4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
UBE2E3Q969T4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20■□□□□ 0.79
UBE2E3Q969T4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20■□□□□ 0.79
UBE2E3Q969T4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20■□□□□ 0.79
UBE2E3Q969T4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
UBE2E3Q969T4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20■□□□□ 0.79
UBE2E3Q969T4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBE2E3Q969T4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBE2E3Q969T4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.99■□□□□ 0.79
UBE2E3Q969T4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 AC019069.1-201ENST00000610008 1333 ntBASIC19.98■□□□□ 0.79
UBE2E3Q969T4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBE2E3Q969T4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBE2E3Q969T4 SLC7A5P1-201ENST00000568957 537 ntBASIC19.97■□□□□ 0.79
UBE2E3Q969T4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms