Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.84■□□□□ 0.61
PHF3Q92576 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PHF3Q92576 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 POU5F1P4-201ENST00000413175 1085 ntBASIC18.84■□□□□ 0.61
PHF3Q92576 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 AC016405.3-201ENST00000607710 860 ntBASIC18.84■□□□□ 0.61
PHF3Q92576 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.84■□□□□ 0.61
PHF3Q92576 AL137060.1-201ENST00000618151 2648 ntBASIC18.84■□□□□ 0.61
PHF3Q92576 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.84■□□□□ 0.61
PHF3Q92576 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PHF3Q92576 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHF3Q92576 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHF3Q92576 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.83■□□□□ 0.61
PHF3Q92576 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PHF3Q92576 AC003102.1-202ENST00000563394 1796 ntBASIC18.83■□□□□ 0.61
PHF3Q92576 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PHF3Q92576 TSPY20P-201ENST00000450910 630 ntBASIC18.83■□□□□ 0.61
PHF3Q92576 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.83■□□□□ 0.61
PHF3Q92576 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
PHF3Q92576 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
PHF3Q92576 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF3Q92576 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF3Q92576 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF3Q92576 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.6
PHF3Q92576 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF3Q92576 TMEM191A-211ENST00000637163 1067 ntBASIC18.83■□□□□ 0.6
PHF3Q92576 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PHF3Q92576 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF3Q92576 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF3Q92576 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.82■□□□□ 0.6
PHF3Q92576 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.82■□□□□ 0.6
PHF3Q92576 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.82■□□□□ 0.6
PHF3Q92576 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF3Q92576 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHF3Q92576 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF3Q92576 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
PHF3Q92576 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
PHF3Q92576 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF3Q92576 TERF1P5-201ENST00000477545 1207 ntBASIC18.81■□□□□ 0.6
PHF3Q92576 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF3Q92576 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.81■□□□□ 0.6
PHF3Q92576 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PHF3Q92576 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PHF3Q92576 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF3Q92576 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF3Q92576 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.81■□□□□ 0.6
PHF3Q92576 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.81■□□□□ 0.6
PHF3Q92576 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.81■□□□□ 0.6
PHF3Q92576 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHF3Q92576 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PHF3Q92576 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF3Q92576 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.8■□□□□ 0.6
PHF3Q92576 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHF3Q92576 AL162412.1-201ENST00000567129 965 ntBASIC18.8■□□□□ 0.6
PHF3Q92576 AC083880.1-201ENST00000608266 535 ntBASIC18.8■□□□□ 0.6
PHF3Q92576 AC133041.1-202ENST00000642053 222 ntBASIC18.8■□□□□ 0.6
PHF3Q92576 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PHF3Q92576 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.8■□□□□ 0.6
PHF3Q92576 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHF3Q92576 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PHF3Q92576 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 AL512625.2-201ENST00000417533 625 ntBASIC18.79■□□□□ 0.6
PHF3Q92576 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PHF3Q92576 AC120498.10-201ENST00000621827 505 ntBASIC18.79■□□□□ 0.6
PHF3Q92576 OR10C1-204ENST00000622521 1039 ntBASIC18.79■□□□□ 0.6
PHF3Q92576 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF3Q92576 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF3Q92576 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PHF3Q92576 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF3Q92576 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.79■□□□□ 0.6
PHF3Q92576 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms