Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF139Q8WU17 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF139Q8WU17 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF139Q8WU17 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF139Q8WU17 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 AC090192.1-201ENST00000517740 490 ntBASIC21.9■■□□□ 1.1
RNF139Q8WU17 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF139Q8WU17 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF139Q8WU17 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 AC026310.3-201ENST00000625186 2373 ntBASIC21.89■■□□□ 1.1
RNF139Q8WU17 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
RNF139Q8WU17 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF139Q8WU17 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF139Q8WU17 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF139Q8WU17 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF139Q8WU17 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 CDCA4P2-201ENST00000441182 718 ntBASIC21.88■■□□□ 1.09
RNF139Q8WU17 DUX4L16-201ENST00000555130 1264 ntBASIC21.88■■□□□ 1.09
RNF139Q8WU17 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF139Q8WU17 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF139Q8WU17 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF139Q8WU17 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF139Q8WU17 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF139Q8WU17 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 AC026185.1-201ENST00000445748 174 ntBASIC21.87■■□□□ 1.09
RNF139Q8WU17 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 AC231657.2-201ENST00000624556 255 ntBASIC21.87■■□□□ 1.09
RNF139Q8WU17 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
RNF139Q8WU17 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF139Q8WU17 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF139Q8WU17 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF139Q8WU17 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF139Q8WU17 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 TERF1P5-201ENST00000477545 1207 ntBASIC21.86■■□□□ 1.09
RNF139Q8WU17 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF139Q8WU17 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF139Q8WU17 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.86■■□□□ 1.09
RNF139Q8WU17 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF139Q8WU17 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RNF139Q8WU17 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF139Q8WU17 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
RNF139Q8WU17 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF139Q8WU17 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF139Q8WU17 AC007322.1-201ENST00000426983 750 ntBASIC21.85■■□□□ 1.09
RNF139Q8WU17 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RNF139Q8WU17 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms