Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TRIM48Q8IWZ4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 GPX1P1-201ENST00000388829 606 ntBASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 CNN2P6-201ENST00000439038 900 ntBASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TRIM48Q8IWZ4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 AL109923.1-201ENST00000618799 583 ntBASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TRIM48Q8IWZ4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 NCF1B-203ENST00000435988 1254 ntBASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 AL121832.2-201ENST00000610979 668 ntBASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TRIM48Q8IWZ4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TRIM48Q8IWZ4 C11orf96-202ENST00000528572 1834 ntBASIC20.39■□□□□ 0.86
TRIM48Q8IWZ4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 AC245052.3-201ENST00000450182 901 ntBASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRIM48Q8IWZ4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 EP400NL-214ENST00000641289 2402 ntBASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 AC007322.4-201ENST00000509611 723 ntBASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 AC104771.1-201ENST00000603335 964 ntBASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 AL050303.2-201ENST00000619798 666 ntBASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 AC008694.1-202ENST00000636953 945 ntBASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.38■□□□□ 0.85
TRIM48Q8IWZ4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms