Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HIST1H3AP68431 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HIST1H3AP68431 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.21■□□□□ 0.5
HIST1H3AP68431 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HIST1H3AP68431 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
HIST1H3AP68431 PLK5-205ENST00000642079 1969 ntBASIC18.21■□□□□ 0.5
HIST1H3AP68431 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.2■□□□□ 0.5
HIST1H3AP68431 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 AP001160.3-201ENST00000601484 763 ntBASIC18.2■□□□□ 0.5
HIST1H3AP68431 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HIST1H3AP68431 AC121338.2-201ENST00000622535 1744 ntBASIC18.2■□□□□ 0.5
HIST1H3AP68431 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.2■□□□□ 0.5
HIST1H3AP68431 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 AC006128.1-201ENST00000624704 1661 ntBASIC18.19■□□□□ 0.5
HIST1H3AP68431 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 KRT18P20-201ENST00000548986 1279 ntBASIC18.19■□□□□ 0.5
HIST1H3AP68431 AC004854.2-201ENST00000608450 1441 ntBASIC18.19■□□□□ 0.5
HIST1H3AP68431 RARRES2P11-201ENST00000635158 484 ntBASIC18.19■□□□□ 0.5
HIST1H3AP68431 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.19■□□□□ 0.5
HIST1H3AP68431 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HIST1H3AP68431 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H3AP68431 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
HIST1H3AP68431 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HIST1H3AP68431 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
HIST1H3AP68431 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.18■□□□□ 0.5
HIST1H3AP68431 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
HIST1H3AP68431 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 AC120498.10-201ENST00000621827 505 ntBASIC18.17■□□□□ 0.5
HIST1H3AP68431 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
HIST1H3AP68431 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
HIST1H3AP68431 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST1H3AP68431 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST1H3AP68431 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 SLC7A5P2-201ENST00000553010 536 ntBASIC18.16■□□□□ 0.5
HIST1H3AP68431 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 KRT18P61-201ENST00000585825 1298 ntBASIC18.16■□□□□ 0.5
HIST1H3AP68431 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
HIST1H3AP68431 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
HIST1H3AP68431 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms