Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.06■□□□□ 0.16
Sec61a1P61620 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Gm42569-201ENSMUST00000200539 472 ntBASIC16.06■□□□□ 0.16
Sec61a1P61620 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sec61a1P61620 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.05■□□□□ 0.16
Sec61a1P61620 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.05■□□□□ 0.16
Sec61a1P61620 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.05■□□□□ 0.16
Sec61a1P61620 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Gm9988-201ENSMUST00000069786 435 ntBASIC16.05■□□□□ 0.16
Sec61a1P61620 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sec61a1P61620 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Sec61a1P61620 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.05■□□□□ 0.16
Sec61a1P61620 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Sec61a1P61620 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.05■□□□□ 0.16
Sec61a1P61620 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sec61a1P61620 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.04■□□□□ 0.16
Sec61a1P61620 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a1P61620 Gm27801-201ENSMUST00000184174 223 ntBASIC16.04■□□□□ 0.16
Sec61a1P61620 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sec61a1P61620 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sec61a1P61620 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a1P61620 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sec61a1P61620 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Sec61a1P61620 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sec61a1P61620 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.03■□□□□ 0.16
Sec61a1P61620 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Sec61a1P61620 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.02■□□□□ 0.16
Sec61a1P61620 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Gm42778-201ENSMUST00000199644 553 ntBASIC16.02■□□□□ 0.16
Sec61a1P61620 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sec61a1P61620 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Sec61a1P61620 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sec61a1P61620 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sec61a1P61620 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms