Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2DP55273 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2DP55273 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.6■□□□□ 0.89
CDKN2DP55273 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2DP55273 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDKN2DP55273 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2DP55273 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDKN2DP55273 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.6■□□□□ 0.89
CDKN2DP55273 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.6■□□□□ 0.89
CDKN2DP55273 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDKN2DP55273 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDKN2DP55273 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CDKN2DP55273 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDKN2DP55273 AC123595.1-201ENST00000440769 1046 ntBASIC20.59■□□□□ 0.89
CDKN2DP55273 YBX1P1-201ENST00000445822 960 ntBASIC20.59■□□□□ 0.89
CDKN2DP55273 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.59■□□□□ 0.89
CDKN2DP55273 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.59■□□□□ 0.89
CDKN2DP55273 AC138907.5-202ENST00000569484 235 ntBASIC20.59■□□□□ 0.89
CDKN2DP55273 TERF1P2-201ENST00000583350 1212 ntBASIC20.59■□□□□ 0.89
CDKN2DP55273 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CDKN2DP55273 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2DP55273 FEM1AP1-201ENST00000431297 1995 ntBASIC20.59■□□□□ 0.89
CDKN2DP55273 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKN2DP55273 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDKN2DP55273 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKN2DP55273 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.58■□□□□ 0.89
CDKN2DP55273 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.58■□□□□ 0.89
CDKN2DP55273 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.58■□□□□ 0.89
CDKN2DP55273 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2DP55273 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDKN2DP55273 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CDKN2DP55273 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CDKN2DP55273 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN2DP55273 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.58■□□□□ 0.88
CDKN2DP55273 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.58■□□□□ 0.88
CDKN2DP55273 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.57■□□□□ 0.88
CDKN2DP55273 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKN2DP55273 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2DP55273 LINC01006-201ENST00000333319 2292 ntBASIC20.57■□□□□ 0.88
CDKN2DP55273 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN2DP55273 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CDKN2DP55273 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKN2DP55273 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN2DP55273 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDKN2DP55273 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.56■□□□□ 0.88
CDKN2DP55273 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 POU5F1P4-201ENST00000413175 1085 ntBASIC20.56■□□□□ 0.88
CDKN2DP55273 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN2DP55273 CCDC92B-201ENST00000575506 885 ntBASIC20.56■□□□□ 0.88
CDKN2DP55273 AC104187.1-201ENST00000607510 612 ntBASIC20.56■□□□□ 0.88
CDKN2DP55273 AC008175.2-201ENST00000612840 297 ntBASIC20.56■□□□□ 0.88
CDKN2DP55273 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDKN2DP55273 AC073130.3-201ENST00000624389 2278 ntBASIC20.56■□□□□ 0.88
CDKN2DP55273 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2DP55273 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDKN2DP55273 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKN2DP55273 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKN2DP55273 AC010141.2-201ENST00000452426 721 ntBASIC20.55■□□□□ 0.88
CDKN2DP55273 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKN2DP55273 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.55■□□□□ 0.88
CDKN2DP55273 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.55■□□□□ 0.88
CDKN2DP55273 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKN2DP55273 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDKN2DP55273 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2DP55273 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms