Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA6P31267 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA6P31267 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA6P31267 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HOXA6P31267 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.79■□□□□ 0.92
HOXA6P31267 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HOXA6P31267 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA6P31267 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.79■□□□□ 0.92
HOXA6P31267 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXA6P31267 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.79■□□□□ 0.92
HOXA6P31267 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXA6P31267 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA6P31267 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA6P31267 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HOXA6P31267 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
HOXA6P31267 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA6P31267 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA6P31267 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA6P31267 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXA6P31267 MTDHP1-201ENST00000605323 784 ntBASIC20.78■□□□□ 0.92
HOXA6P31267 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 AL135905.2-201ENST00000584934 1404 ntBASIC20.78■□□□□ 0.92
HOXA6P31267 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA6P31267 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
HOXA6P31267 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA6P31267 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA6P31267 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 CYP21A1P-202ENST00000354927 1481 ntBASIC20.77■□□□□ 0.92
HOXA6P31267 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXA6P31267 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
HOXA6P31267 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXA6P31267 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.77■□□□□ 0.92
HOXA6P31267 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA6P31267 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXA6P31267 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA6P31267 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA6P31267 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA6P31267 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXA6P31267 AC105020.6-201ENST00000621523 1217 ntBASIC20.76■□□□□ 0.91
HOXA6P31267 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA6P31267 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA6P31267 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA6P31267 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HOXA6P31267 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA6P31267 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA6P31267 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA6P31267 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.75■□□□□ 0.91
HOXA6P31267 AL049637.2-201ENST00000641778 930 ntBASIC20.75■□□□□ 0.91
HOXA6P31267 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
HOXA6P31267 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA6P31267 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
HOXA6P31267 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HOXA6P31267 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXA6P31267 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
HOXA6P31267 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HOXA6P31267 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 AC124016.1-201ENST00000609552 612 ntBASIC20.74■□□□□ 0.91
HOXA6P31267 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXA6P31267 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms