Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 AC073111.5-205ENST00000641717 521 ntBASIC18.88■□□□□ 0.61
CD53P19397 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
CD53P19397 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CD53P19397 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.88■□□□□ 0.61
CD53P19397 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
CD53P19397 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.87■□□□□ 0.61
CD53P19397 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CD53P19397 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.87■□□□□ 0.61
CD53P19397 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.87■□□□□ 0.61
CD53P19397 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CD53P19397 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.87■□□□□ 0.61
CD53P19397 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.87■□□□□ 0.61
CD53P19397 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CD53P19397 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD53P19397 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.86■□□□□ 0.61
CD53P19397 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CD53P19397 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
CD53P19397 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CD53P19397 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CD53P19397 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CD53P19397 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.86■□□□□ 0.61
CD53P19397 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.86■□□□□ 0.61
CD53P19397 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CD53P19397 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.86■□□□□ 0.61
CD53P19397 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD53P19397 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.85■□□□□ 0.61
CD53P19397 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.85■□□□□ 0.61
CD53P19397 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.85■□□□□ 0.61
CD53P19397 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 TPRG1LP1-201ENST00000598702 760 ntBASIC18.85■□□□□ 0.61
CD53P19397 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CD53P19397 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
CD53P19397 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD53P19397 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CD53P19397 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.84■□□□□ 0.61
CD53P19397 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.84■□□□□ 0.61
CD53P19397 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.84■□□□□ 0.61
CD53P19397 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
CD53P19397 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.84■□□□□ 0.61
CD53P19397 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 FEM1AP1-201ENST00000431297 1995 ntBASIC18.84■□□□□ 0.61
CD53P19397 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.84■□□□□ 0.61
CD53P19397 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD53P19397 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.84■□□□□ 0.61
CD53P19397 OR7E47P-201ENST00000546390 1422 ntBASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms