Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.76■□□□□ 0.75
TPRP12270 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.76■□□□□ 0.75
TPRP12270 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.76■□□□□ 0.75
TPRP12270 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.76■□□□□ 0.75
TPRP12270 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.76■□□□□ 0.75
TPRP12270 AC120498.10-201ENST00000621827 505 ntBASIC19.76■□□□□ 0.75
TPRP12270 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TPRP12270 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.76■□□□□ 0.75
TPRP12270 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TPRP12270 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.76■□□□□ 0.75
TPRP12270 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.76■□□□□ 0.75
TPRP12270 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
TPRP12270 AC100791.3-201ENST00000617619 330 ntBASIC19.76■□□□□ 0.75
TPRP12270 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPRP12270 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPRP12270 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TPRP12270 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.75■□□□□ 0.75
TPRP12270 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TPRP12270 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPRP12270 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TPRP12270 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.75■□□□□ 0.75
TPRP12270 AL355355.2-201ENST00000442321 338 ntBASIC19.75■□□□□ 0.75
TPRP12270 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TPRP12270 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TPRP12270 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.74■□□□□ 0.75
TPRP12270 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.74■□□□□ 0.75
TPRP12270 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TPRP12270 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPRP12270 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TPRP12270 AC110285.5-201ENST00000611501 352 ntBASIC19.74■□□□□ 0.75
TPRP12270 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.74■□□□□ 0.75
TPRP12270 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.74■□□□□ 0.75
TPRP12270 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TPRP12270 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.74■□□□□ 0.75
TPRP12270 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TPRP12270 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TPRP12270 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPRP12270 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.73■□□□□ 0.75
TPRP12270 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPRP12270 AL137013.1-201ENST00000432946 1228 ntBASIC19.73■□□□□ 0.75
TPRP12270 AC104076.2-201ENST00000448912 469 ntBASIC19.73■□□□□ 0.75
TPRP12270 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.73■□□□□ 0.75
TPRP12270 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPRP12270 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TPRP12270 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.73■□□□□ 0.75
TPRP12270 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TPRP12270 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TPRP12270 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPRP12270 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPRP12270 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.72■□□□□ 0.75
TPRP12270 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPRP12270 CLEC4GP1-201ENST00000596555 870 ntBASIC19.72■□□□□ 0.75
TPRP12270 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.72■□□□□ 0.75
TPRP12270 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPRP12270 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TPRP12270 OR7E47P-201ENST00000546390 1422 ntBASIC19.72■□□□□ 0.75
TPRP12270 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TPRP12270 AC243732.1-201ENST00000612648 864 ntBASIC19.72■□□□□ 0.75
TPRP12270 AC120498.8-201ENST00000614275 531 ntBASIC19.72■□□□□ 0.75
TPRP12270 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TPRP12270 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TPRP12270 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPRP12270 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.71■□□□□ 0.75
TPRP12270 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TPRP12270 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.71■□□□□ 0.75
TPRP12270 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPRP12270 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.71■□□□□ 0.75
TPRP12270 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.71■□□□□ 0.75
TPRP12270 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.71■□□□□ 0.75
TPRP12270 AC145676.1-201ENST00000514988 2004 ntBASIC19.71■□□□□ 0.75
TPRP12270 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TPRP12270 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPRP12270 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.71■□□□□ 0.75
TPRP12270 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.71■□□□□ 0.75
TPRP12270 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TPRP12270 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.7■□□□□ 0.74
TPRP12270 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.7■□□□□ 0.74
TPRP12270 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TPRP12270 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.7■□□□□ 0.74
TPRP12270 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TPRP12270 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.7■□□□□ 0.74
TPRP12270 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPRP12270 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TPRP12270 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms