Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-CO1P00395 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.36■■□□□ 1.01
MT-CO1P00395 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
MT-CO1P00395 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.36■■□□□ 1.01
MT-CO1P00395 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.36■■□□□ 1.01
MT-CO1P00395 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.36■■□□□ 1.01
MT-CO1P00395 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
MT-CO1P00395 KRT16P2-201ENST00000414673 1423 ntBASIC21.36■■□□□ 1.01
MT-CO1P00395 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-CO1P00395 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.36■■□□□ 1.01
MT-CO1P00395 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
MT-CO1P00395 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.35■■□□□ 1.01
MT-CO1P00395 TERF1P5-201ENST00000477545 1207 ntBASIC21.35■■□□□ 1.01
MT-CO1P00395 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 AC231657.2-201ENST00000624556 255 ntBASIC21.35■■□□□ 1.01
MT-CO1P00395 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-CO1P00395 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-CO1P00395 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MT-CO1P00395 MIR663A-201ENST00000385250 93 ntBASIC21.34■■□□□ 1.01
MT-CO1P00395 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.34■■□□□ 1.01
MT-CO1P00395 AC007322.1-201ENST00000426983 750 ntBASIC21.34■■□□□ 1.01
MT-CO1P00395 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.34■■□□□ 1.01
MT-CO1P00395 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 AL050303.2-201ENST00000619798 666 ntBASIC21.34■■□□□ 1.01
MT-CO1P00395 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-CO1P00395 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MT-CO1P00395 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
MT-CO1P00395 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
MT-CO1P00395 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
MT-CO1P00395 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.33■■□□□ 1.01
MT-CO1P00395 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.33■■□□□ 1.01
MT-CO1P00395 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-CO1P00395 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.33■■□□□ 1
MT-CO1P00395 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.33■■□□□ 1
MT-CO1P00395 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
MT-CO1P00395 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.32■■□□□ 1
MT-CO1P00395 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.32■■□□□ 1
MT-CO1P00395 ID1-201ENST00000376105 1233 ntBASIC21.32■■□□□ 1
MT-CO1P00395 AC006970.2-201ENST00000450065 779 ntBASIC21.32■■□□□ 1
MT-CO1P00395 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.32■■□□□ 1
MT-CO1P00395 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MT-CO1P00395 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
MT-CO1P00395 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MT-CO1P00395 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MT-CO1P00395 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
MT-CO1P00395 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.31■■□□□ 1
MT-CO1P00395 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 AC005181.1-201ENST00000604782 1256 ntBASIC21.31■■□□□ 1
MT-CO1P00395 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.31■■□□□ 1
MT-CO1P00395 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.31■■□□□ 1
MT-CO1P00395 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.31■■□□□ 1
MT-CO1P00395 RBM17P2-201ENST00000616397 1405 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms