Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MBD3L4A6NDZ8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 MCRIP2P1-201ENST00000394346 511 ntBASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MBD3L4A6NDZ8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 KRT17P1-201ENST00000399211 1546 ntBASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 AL355472.2-201ENST00000422958 438 ntBASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 POU5F1P3-201ENST00000428824 1078 ntBASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.4■□□□□ 0.54
MBD3L4A6NDZ8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MBD3L4A6NDZ8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 AL589743.5-201ENST00000616611 1050 ntBASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MBD3L4A6NDZ8 AC116050.2-201ENST00000612102 1779 ntBASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
MBD3L4A6NDZ8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms