Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HRH3Q9Y5N1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 UBE2DNL-204ENST00000602536 740 ntBASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 AL109923.1-201ENST00000618799 583 ntBASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
HRH3Q9Y5N1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
HRH3Q9Y5N1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HRH3Q9Y5N1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 AC061975.6-201ENST00000579045 1553 ntBASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 MIR663A-201ENST00000385250 93 ntBASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 DUX4L16-201ENST00000555130 1264 ntBASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HRH3Q9Y5N1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 AL050303.2-201ENST00000619798 666 ntBASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HRH3Q9Y5N1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 AL355802.2-201ENST00000402069 882 ntBASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
HRH3Q9Y5N1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HRH3Q9Y5N1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms