Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3H4Q9UPT8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
ZC3H4Q9UPT8 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 CDV3P1-201ENST00000471403 739 ntBASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 AC124016.1-201ENST00000609552 612 ntBASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 AL590326.2-201ENST00000625139 305 ntBASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 LINC00526-201ENST00000581067 1875 ntBASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3H4Q9UPT8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 RN7SL850P-201ENST00000579959 291 ntBASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 AC142381.3-201ENST00000568208 1670 ntBASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
ZC3H4Q9UPT8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 ARMC10P1-201ENST00000313754 855 ntBASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 AC091799.1-201ENST00000422823 811 ntBASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 MTDHP1-201ENST00000605323 784 ntBASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 AC113410.3-201ENST00000623366 203 ntBASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC25.48■■□□□ 1.67
ZC3H4Q9UPT8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 AL355075.4-201ENST00000554988 638 ntBASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3H4Q9UPT8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 TSPY15P-201ENST00000457163 923 ntBASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3H4Q9UPT8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ZC3H4Q9UPT8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3H4Q9UPT8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms