Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
ABCF3Q9NUQ8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 PCDHAC2-203ENST00000615316 3011 ntBASIC21.14■□□□□ 0.98
ABCF3Q9NUQ8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 AC233992.3-201ENST00000607491 485 ntBASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ABCF3Q9NUQ8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 BX842568.3-201ENST00000418104 571 ntBASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 AL355001.2-201ENST00000620617 1191 ntBASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ABCF3Q9NUQ8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 EDA-201ENST00000338901 1233 ntBASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 AP001330.3-201ENST00000520123 633 ntBASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 AC142381.2-201ENST00000566120 298 ntBASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 AC087239.1-201ENST00000622671 572 ntBASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ABCF3Q9NUQ8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 AL031602.1-201ENST00000633169 911 ntBASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 AC026471.6-201ENST00000622954 1905 ntBASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ABCF3Q9NUQ8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ABCF3Q9NUQ8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms