Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.59■■□□□ 1.05
RPRD1AQ96P16 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RPRD1AQ96P16 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.58■■□□□ 1.04
RPRD1AQ96P16 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RPRD1AQ96P16 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 TERF1P5-201ENST00000477545 1207 ntBASIC21.56■■□□□ 1.04
RPRD1AQ96P16 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPRD1AQ96P16 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 AC026185.1-201ENST00000445748 174 ntBASIC21.55■■□□□ 1.04
RPRD1AQ96P16 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 AC231657.2-201ENST00000624556 255 ntBASIC21.55■■□□□ 1.04
RPRD1AQ96P16 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.55■■□□□ 1.04
RPRD1AQ96P16 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 Z98882.1-201ENST00000622160 2253 ntBASIC21.54■■□□□ 1.04
RPRD1AQ96P16 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 RAP2CP1-201ENST00000605103 478 ntBASIC21.54■■□□□ 1.04
RPRD1AQ96P16 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPRD1AQ96P16 RBM17P2-201ENST00000616397 1405 ntBASIC21.54■■□□□ 1.04
RPRD1AQ96P16 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC007322.1-201ENST00000426983 750 ntBASIC21.53■■□□□ 1.04
RPRD1AQ96P16 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.53■■□□□ 1.04
RPRD1AQ96P16 AC245052.3-201ENST00000450182 901 ntBASIC21.53■■□□□ 1.04
RPRD1AQ96P16 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms