Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 KRT18P56-201ENST00000507275 550 ntBASIC20.68■□□□□ 0.9
CFAP54Q96N23 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CFAP54Q96N23 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.68■□□□□ 0.9
CFAP54Q96N23 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CFAP54Q96N23 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP54Q96N23 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 AC087388.1-201ENST00000571370 1112 ntBASIC20.67■□□□□ 0.9
CFAP54Q96N23 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP54Q96N23 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 RBM17P2-201ENST00000616397 1405 ntBASIC20.66■□□□□ 0.9
CFAP54Q96N23 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 C9orf163-202ENST00000624034 2573 ntBASIC20.66■□□□□ 0.9
CFAP54Q96N23 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CFAP54Q96N23 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP54Q96N23 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 TERF1P1-201ENST00000311003 1181 ntBASIC20.65■□□□□ 0.9
CFAP54Q96N23 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CFAP54Q96N23 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP54Q96N23 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CFAP54Q96N23 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.64■□□□□ 0.9
CFAP54Q96N23 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.64■□□□□ 0.9
CFAP54Q96N23 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.64■□□□□ 0.9
CFAP54Q96N23 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.64■□□□□ 0.9
CFAP54Q96N23 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CFAP54Q96N23 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 GPALPP1-207ENST00000611650 899 ntBASIC20.64■□□□□ 0.89
CFAP54Q96N23 AC006557.6-201ENST00000623071 864 ntBASIC20.64■□□□□ 0.89
CFAP54Q96N23 AL023875.1-201ENST00000640777 796 ntBASIC20.64■□□□□ 0.89
CFAP54Q96N23 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP54Q96N23 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP54Q96N23 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP54Q96N23 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP54Q96N23 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.64■□□□□ 0.89
CFAP54Q96N23 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.64■□□□□ 0.89
CFAP54Q96N23 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.63■□□□□ 0.89
CFAP54Q96N23 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 AC133681.1-201ENST00000465482 601 ntBASIC20.63■□□□□ 0.89
CFAP54Q96N23 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 KRT8P9-201ENST00000558927 1449 ntBASIC20.63■□□□□ 0.89
CFAP54Q96N23 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CFAP54Q96N23 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP54Q96N23 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CFAP54Q96N23 AC239809.2-201ENST00000415381 517 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms