Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
COL27A1Q8IZC6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 AC105020.6-201ENST00000621523 1217 ntBASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 HLA-B-256ENST00000639848 1089 ntBASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COL27A1Q8IZC6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 C1QBPP2-201ENST00000528754 825 ntBASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.89■□□□□ 0.77
COL27A1Q8IZC6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 UBE2SP1-201ENST00000450587 669 ntBASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 RPPH1-201ENST00000516869 333 ntBASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 AC092368.3-202ENST00000574180 1591 ntBASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 AC092053.2-201ENST00000640557 1818 ntBASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL27A1Q8IZC6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 CDV3P1-201ENST00000471403 739 ntBASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.87■□□□□ 0.77
COL27A1Q8IZC6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 FAM197Y4-202ENST00000622692 608 ntBASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
COL27A1Q8IZC6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms