Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CROCCP3Q8IVE0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CROCCP3Q8IVE0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CROCCP3Q8IVE0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CROCCP3Q8IVE0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CROCCP3Q8IVE0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CROCCP3Q8IVE0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.62
CROCCP3Q8IVE0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 NEFHP1-201ENST00000412845 2629 ntBASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.89■□□□□ 0.61
CROCCP3Q8IVE0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 AL158211.5-201ENST00000623583 2518 ntBASIC18.88■□□□□ 0.61
CROCCP3Q8IVE0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.87■□□□□ 0.61
CROCCP3Q8IVE0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms