Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rif1Q6PR54 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Gm5264-201ENSMUST00000190584 848 ntBASIC15.44■□□□□ 0.06
Rif1Q6PR54 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rif1Q6PR54 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Gm27702-201ENSMUST00000184512 56 ntBASIC15.43■□□□□ 0.06
Rif1Q6PR54 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.43■□□□□ 0.06
Rif1Q6PR54 Gm2756-201ENSMUST00000195851 400 ntBASIC15.43■□□□□ 0.06
Rif1Q6PR54 Gm2651-201ENSMUST00000203560 838 ntBASIC15.43■□□□□ 0.06
Rif1Q6PR54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.43■□□□□ 0.06
Rif1Q6PR54 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Gm5913-201ENSMUST00000119397 1399 ntBASIC15.42■□□□□ 0.06
Rif1Q6PR54 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rif1Q6PR54 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.41■□□□□ 0.06
Rif1Q6PR54 Gm10175-201ENSMUST00000086013 645 ntBASIC15.41■□□□□ 0.06
Rif1Q6PR54 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Gm14057-201ENSMUST00000120631 482 ntBASIC15.41■□□□□ 0.06
Rif1Q6PR54 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rif1Q6PR54 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Gm6736-201ENSMUST00000166583 948 ntBASIC15.4■□□□□ 0.06
Rif1Q6PR54 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rif1Q6PR54 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.4■□□□□ 0.06
Rif1Q6PR54 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rif1Q6PR54 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Gm37292-201ENSMUST00000192062 758 ntBASIC15.39■□□□□ 0.05
Rif1Q6PR54 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Mtag2-201ENSMUST00000058665 714 ntBASIC15.39■□□□□ 0.05
Rif1Q6PR54 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rif1Q6PR54 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms