Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM53Q6P2H8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM53Q6P2H8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.02■□□□□ 0.63
TMEM53Q6P2H8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM53Q6P2H8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 MIR638-201ENST00000385237 100 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 IGHV3-19-201ENST00000521488 291 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 AC079089.2-201ENST00000531211 1277 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 AL031432.3-201ENST00000607698 485 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 AL136967.2-201ENST00000623968 743 ntBASIC19■□□□□ 0.63
TMEM53Q6P2H8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19■□□□□ 0.63
TMEM53Q6P2H8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM53Q6P2H8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 SUDS3P1-201ENST00000505831 966 ntBASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 OXCT2P1-201ENST00000447263 1535 ntBASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM53Q6P2H8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM53Q6P2H8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 TSPY26P-201ENST00000476365 1326 ntBASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TMEM53Q6P2H8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM53Q6P2H8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms