Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.76■■□□□ 1.07
TTC39BQ5VTQ0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 AC005229.4-201ENST00000610085 2198 ntBASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 AC120498.10-201ENST00000621827 505 ntBASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TTC39BQ5VTQ0 AC026471.6-201ENST00000622954 1905 ntBASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 UBE2DNL-204ENST00000602536 740 ntBASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TTC39BQ5VTQ0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 SLC7A5P1-201ENST00000568957 537 ntBASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC39BQ5VTQ0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 MYCNOS-205ENST00000641950 531 ntBASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC39BQ5VTQ0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC39BQ5VTQ0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TTC39BQ5VTQ0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms