Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 MUS81YDR386W 1899 nt3.09□□□□□ -1.92
RPT4P53549 OSW7YFR039C 1533 nt3.09□□□□□ -1.92
RPT4P53549 AEP1YMR064W 1557 nt3.08□□□□□ -1.92
RPT4P53549 GYL1YMR192W 2163 nt3.08□□□□□ -1.92
RPT4P53549 HFM1YGL251C 3564 nt3.08□□□□□ -1.92
RPT4P53549 NRG1YDR043C 696 nt3.08□□□□□ -1.92
RPT4P53549 FMN1YDR236C 657 nt3.08□□□□□ -1.92
RPT4P53549 YGL082WYGL082W 1146 nt3.08□□□□□ -1.92
RPT4P53549 RPL6BYLR448W 531 nt3.08□□□□□ -1.92
RPT4P53549 INO4YOL108C 456 nt3.08□□□□□ -1.92
RPT4P53549 GCY1YOR120W 939 nt3.08□□□□□ -1.92
RPT4P53549 GIS4YML006C 2325 nt3.08□□□□□ -1.92
RPT4P53549 VAC14YLR386W 2643 nt3.07□□□□□ -1.92
RPT4P53549 SPP382YLR424W 2127 nt3.07□□□□□ -1.92
RPT4P53549 ENA5YDR038C 3276 nt3.07□□□□□ -1.92
RPT4P53549 ATC1YDR184C 885 nt3.07□□□□□ -1.92
RPT4P53549 RSM27YGR215W 333 nt3.07□□□□□ -1.92
RPT4P53549 YHL002C-AYHL002C-A 489 nt3.07□□□□□ -1.92
RPT4P53549 IKI1YHR187W 930 nt3.07□□□□□ -1.92
RPT4P53549 YHR213WYHR213W 597 nt3.07□□□□□ -1.92
RPT4P53549 YLL037WYLL037W 381 nt3.07□□□□□ -1.92
RPT4P53549 YAR062WYAR062W 597 nt3.07□□□□□ -1.92
RPT4P53549 UBC12YLR306W 567 nt3.07□□□□□ -1.92
RPT4P53549 FAR3YMR052W 615 nt3.07□□□□□ -1.92
RPT4P53549 YNL109WYNL109W 546 nt3.07□□□□□ -1.92
RPT4P53549 YPR027CYPR027C 834 nt3.07□□□□□ -1.92
RPT4P53549 RFC5YBR087W 1065 nt3.07□□□□□ -1.92
RPT4P53549 snR35snR35 204 nt3.07□□□□□ -1.92
RPT4P53549 KAR4YCL055W 1008 nt3.07□□□□□ -1.92
RPT4P53549 AVT5YBL089W 1380 nt3.07□□□□□ -1.92
RPT4P53549 UBP8YMR223W 1416 nt3.07□□□□□ -1.92
RPT4P53549 MDM36YPR083W 1740 nt3.07□□□□□ -1.92
RPT4P53549 YBP2YGL060W 1926 nt3.07□□□□□ -1.92
RPT4P53549 POL4YCR014C 1749 nt3.06□□□□□ -1.92
RPT4P53549 DOA4YDR069C 2781 nt3.06□□□□□ -1.92
RPT4P53549 DIG2YDR480W 972 nt3.06□□□□□ -1.92
RPT4P53549 CEP3YMR168C 1827 nt3.06□□□□□ -1.92
RPT4P53549 END3YNL084C 1050 nt3.06□□□□□ -1.92
RPT4P53549 PEX6YNL329C 3093 nt3.06□□□□□ -1.92
RPT4P53549 IPP1YBR011C 864 nt3.06□□□□□ -1.92
RPT4P53549 HUA2YOR284W 732 nt3.06□□□□□ -1.92
RPT4P53549 YBR259WYBR259W 2067 nt3.06□□□□□ -1.92
RPT4P53549 DYN1YKR054C 12279 nt3.06□□□□□ -1.92
RPT4P53549 TAO3YIL129C 7131 nt3.06□□□□□ -1.92
RPT4P53549 PTP3YER075C 2787 nt3.06□□□□□ -1.92
RPT4P53549 SYO1YDL063C 1863 nt3.05□□□□□ -1.92
RPT4P53549 RSM24YDR175C 960 nt3.05□□□□□ -1.92
RPT4P53549 GOS1YHL031C 672 nt3.05□□□□□ -1.92
RPT4P53549 ASG7YJL170C 630 nt3.05□□□□□ -1.92
RPT4P53549 YLR154C-HYLR154C-H 132 nt3.05□□□□□ -1.92
RPT4P53549 YLR156C-AYLR156C-A 132 nt3.05□□□□□ -1.92
RPT4P53549 YLR157C-CYLR157C-C 132 nt3.05□□□□□ -1.92
RPT4P53549 YLR159C-AYLR159C-A 132 nt3.05□□□□□ -1.92
RPT4P53549 YMR141CYMR141C 309 nt3.05□□□□□ -1.92
RPT4P53549 MNT3YIL014W 1893 nt3.05□□□□□ -1.92
RPT4P53549 BUD4YJR092W 4344 nt3.05□□□□□ -1.92
RPT4P53549 CST9YLR394W 1449 nt3.04□□□□□ -1.92
RPT4P53549 ESA1YOR244W 1338 nt3.04□□□□□ -1.92
RPT4P53549 TFC1YBR123C 1950 nt3.04□□□□□ -1.92
RPT4P53549 ATP16YDL004W 483 nt3.04□□□□□ -1.92
RPT4P53549 YFL015CYFL015C 495 nt3.04□□□□□ -1.92
RPT4P53549 EFG1YGR271C-A 702 nt3.04□□□□□ -1.92
RPT4P53549 VMA10YHR039C-A 345 nt3.04□□□□□ -1.92
RPT4P53549 YJL032WYJL032W 315 nt3.04□□□□□ -1.92
RPT4P53549 ENV10YLR065C 546 nt3.04□□□□□ -1.92
RPT4P53549 SUB1YMR039C 879 nt3.04□□□□□ -1.92
RPT4P53549 MPD2YOL088C 834 nt3.04□□□□□ -1.92
RPT4P53549 THI80YOR143C 960 nt3.04□□□□□ -1.92
RPT4P53549 SPR2YOR214C 711 nt3.04□□□□□ -1.92
RPT4P53549 CIN2YPL241C 807 nt3.04□□□□□ -1.92
RPT4P53549 SMC2YFR031C 3513 nt3.04□□□□□ -1.92
RPT4P53549 CDH1YGL003C 1701 nt3.04□□□□□ -1.92
RPT4P53549 21S_rRNA21S_rRNA 3296 nt3.04□□□□□ -1.92
RPT4P53549 SPO71YDR104C 3738 nt3.04□□□□□ -1.92
RPT4P53549 UBP14YBR058C 2346 nt3.03□□□□□ -1.92
RPT4P53549 MAK5YBR142W 2322 nt3.03□□□□□ -1.92
RPT4P53549 PEX5YDR244W 1839 nt3.03□□□□□ -1.92
RPT4P53549 ATG13YPR185W 2217 nt3.03□□□□□ -1.92
RPT4P53549 USE1YGL098W 738 nt3.03□□□□□ -1.92
RPT4P53549 YKL070WYKL070W 510 nt3.03□□□□□ -1.92
RPT4P53549 SEC14YMR079W 915 nt3.03□□□□□ -1.92
RPT4P53549 SLM4YBR077C 489 nt3.03□□□□□ -1.92
RPT4P53549 VTC3YPL019C 2508 nt3.03□□□□□ -1.92
RPT4P53549 YGR067CYGR067C 2415 nt3.03□□□□□ -1.92
RPT4P53549 NOP56YLR197W 1515 nt3.03□□□□□ -1.92
RPT4P53549 YLR001CYLR001C 2589 nt3.03□□□□□ -1.93
RPT4P53549 NGG1YDR176W 2109 nt3.02□□□□□ -1.93
RPT4P53549 MET5YJR137C 4329 nt3.02□□□□□ -1.93
RPT4P53549 RPN1YHR027C 2982 nt3.02□□□□□ -1.93
RPT4P53549 AXL1YPR122W 3627 nt3.02□□□□□ -1.93
RPT4P53549 YER165C-AYER165C-A 357 nt3.02□□□□□ -1.93
RPT4P53549 MRPL9YGR220C 810 nt3.02□□□□□ -1.93
RPT4P53549 YHL048C-AYHL048C-A 135 nt3.02□□□□□ -1.93
RPT4P53549 YHR212CYHR212C 336 nt3.02□□□□□ -1.93
RPT4P53549 YIL141WYIL141W 390 nt3.02□□□□□ -1.93
RPT4P53549 DLS1YJL065C 504 nt3.02□□□□□ -1.93
RPT4P53549 YKL066WYKL066W 444 nt3.02□□□□□ -1.93
RPT4P53549 PSY1YKL076C 384 nt3.02□□□□□ -1.93
RPT4P53549 YLR076CYLR076C 423 nt3.02□□□□□ -1.93
RPT4P53549 YAR060CYAR060C 336 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms