Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 BAT1YHR208W 1182 nt2.67□□□□□ -1.98
RTR1P40084 ERV41YML067C 1059 nt2.67□□□□□ -1.98
RTR1P40084 THI80YOR143C 960 nt2.67□□□□□ -1.98
RTR1P40084 IRC8YJL051W 2469 nt2.67□□□□□ -1.98
RTR1P40084 SWR1YDR334W 4545 nt2.66□□□□□ -1.98
RTR1P40084 RNH202YDR279W 1053 nt2.66□□□□□ -1.98
RTR1P40084 BRR6YGL247W 594 nt2.66□□□□□ -1.98
RTR1P40084 YLR311CYLR311C 348 nt2.66□□□□□ -1.98
RTR1P40084 YLR363W-AYLR363W-A 258 nt2.66□□□□□ -1.98
RTR1P40084 TEX1YNL253W 1269 nt2.66□□□□□ -1.98
RTR1P40084 RSA1YPL193W 1146 nt2.66□□□□□ -1.98
RTR1P40084 YPR074W-AYPR074W-A 171 nt2.66□□□□□ -1.98
RTR1P40084 CLN2YPL256C 1638 nt2.66□□□□□ -1.98
RTR1P40084 YFR016CYFR016C 3702 nt2.66□□□□□ -1.98
RTR1P40084 HMO1YDR174W 741 nt2.65□□□□□ -1.99
RTR1P40084 EMP24YGL200C 612 nt2.65□□□□□ -1.99
RTR1P40084 FPR1YNL135C 345 nt2.65□□□□□ -1.99
RTR1P40084 KAP123YER110C 3342 nt2.65□□□□□ -1.99
RTR1P40084 BRE1YDL074C 2103 nt2.65□□□□□ -1.99
RTR1P40084 ENP2YGR145W 2124 nt2.65□□□□□ -1.99
RTR1P40084 SSN2YDR443C 4263 nt2.65□□□□□ -1.99
RTR1P40084 MSH4YFL003C 2637 nt2.64□□□□□ -1.99
RTR1P40084 WHI3YNL197C 1986 nt2.64□□□□□ -1.99
RTR1P40084 YFR032C-BYFR032C-B 264 nt2.64□□□□□ -1.99
RTR1P40084 YGL138CYGL138C 1038 nt2.64□□□□□ -1.99
RTR1P40084 YLR255CYLR255C 354 nt2.64□□□□□ -1.99
RTR1P40084 MRPL33YMR286W 261 nt2.64□□□□□ -1.99
RTR1P40084 HRT1YOL133W 366 nt2.64□□□□□ -1.99
RTR1P40084 FIG1YBR040W 897 nt2.64□□□□□ -1.99
RTR1P40084 SAD1YFR005C 1347 nt2.64□□□□□ -1.99
RTR1P40084 RRP14YKL082C 1305 nt2.64□□□□□ -1.99
RTR1P40084 PSP1YDR505C 2526 nt2.64□□□□□ -1.99
RTR1P40084 YOL098CYOL098C 3114 nt2.64□□□□□ -1.99
RTR1P40084 CDC55YGL190C 1581 nt2.63□□□□□ -1.99
RTR1P40084 YCR015CYCR015C 954 nt2.63□□□□□ -1.99
RTR1P40084 YGL159WYGL159W 1113 nt2.63□□□□□ -1.99
RTR1P40084 YIL161WYIL161W 708 nt2.63□□□□□ -1.99
RTR1P40084 DGR1YNL130C-A 147 nt2.63□□□□□ -1.99
RTR1P40084 SME1YOR159C 285 nt2.63□□□□□ -1.99
RTR1P40084 MSS18YPR134W 807 nt2.63□□□□□ -1.99
RTR1P40084 YSA1YBR111C 696 nt2.63□□□□□ -1.99
RTR1P40084 YNL011CYNL011C 1335 nt2.63□□□□□ -1.99
RTR1P40084 MAK5YBR142W 2322 nt2.63□□□□□ -1.99
RTR1P40084 SEC16YPL085W 6588 nt2.63□□□□□ -1.99
RTR1P40084 YKL075CYKL075C 1353 nt2.62□□□□□ -1.99
RTR1P40084 APC5YOR249C 2058 nt2.62□□□□□ -1.99
RTR1P40084 VHR1YIL056W 1923 nt2.62□□□□□ -1.99
RTR1P40084 YDR537CYDR537C 606 nt2.62□□□□□ -1.99
RTR1P40084 YJR056CYJR056C 711 nt2.62□□□□□ -1.99
RTR1P40084 YML047W-AYML047W-A 366 nt2.62□□□□□ -1.99
RTR1P40084 SUB1YMR039C 879 nt2.62□□□□□ -1.99
RTR1P40084 SIP18YMR175W 240 nt2.62□□□□□ -1.99
RTR1P40084 PNO1YOR145C 825 nt2.62□□□□□ -1.99
RTR1P40084 SSP2YOR242C 1116 nt2.62□□□□□ -1.99
RTR1P40084 PRM4YPL156C 855 nt2.62□□□□□ -1.99
RTR1P40084 TRA1YHR099W 11235 nt2.62□□□□□ -1.99
RTR1P40084 BOI1YBL085W 2943 nt2.62□□□□□ -1.99
RTR1P40084 AVT5YBL089W 1380 nt2.61□□□□□ -1.99
RTR1P40084 TAE2YPL009C 3117 nt2.61□□□□□ -1.99
RTR1P40084 YDR290WYDR290W 330 nt2.61□□□□□ -1.99
RTR1P40084 DAD4YDR320C-A 219 nt2.61□□□□□ -1.99
RTR1P40084 YOL114CYOL114C 609 nt2.61□□□□□ -1.99
RTR1P40084 HSP10YOR020C 321 nt2.61□□□□□ -1.99
RTR1P40084 YOR277CYOR277C 309 nt2.61□□□□□ -1.99
RTR1P40084 LTP1YPR073C 486 nt2.61□□□□□ -1.99
RTR1P40084 DUG2YBR281C 2637 nt2.61□□□□□ -1.99
RTR1P40084 AVT2YEL064C 1443 nt2.6□□□□□ -1.99
RTR1P40084 KOG1YHR186C 4674 nt2.6□□□□□ -1.99
RTR1P40084 YDL026WYDL026W 312 nt2.6□□□□□ -1.99
RTR1P40084 TFA2YKR062W 987 nt2.6□□□□□ -1.99
RTR1P40084 YNL162W-AYNL162W-A 219 nt2.6□□□□□ -1.99
RTR1P40084 RRG7YOR305W 729 nt2.6□□□□□ -1.99
RTR1P40084 YPL039WYPL039W 951 nt2.6□□□□□ -1.99
RTR1P40084 GRX1YCL035C 333 nt2.6□□□□□ -1.99
RTR1P40084 YOL057WYOL057W 2136 nt2.6□□□□□ -1.99
RTR1P40084 STN1YDR082W 1485 nt2.59□□□□□ -1.99
RTR1P40084 IRA2YOL081W 9240 nt2.59□□□□□ -1.99
RTR1P40084 YLL044WYLL044W 447 nt2.59□□□□□ -1.99
RTR1P40084 CDC123YLR215C 1083 nt2.59□□□□□ -1.99
RTR1P40084 TAF4YMR005W 1167 nt2.59□□□□□ -1.99
RTR1P40084 FMP41YNL168C 780 nt2.59□□□□□ -1.99
RTR1P40084 DUG3YNL191W 1074 nt2.59□□□□□ -1.99
RTR1P40084 RRG8YPR116W 834 nt2.59□□□□□ -1.99
RTR1P40084 YBR259WYBR259W 2067 nt2.59□□□□□ -2
RTR1P40084 ISW1YBR245C 3390 nt2.58□□□□□ -2
RTR1P40084 YDR209CYDR209C 414 nt2.58□□□□□ -2
RTR1P40084 YFR010W-AYFR010W-A 189 nt2.58□□□□□ -2
RTR1P40084 DID4YKL002W 699 nt2.58□□□□□ -2
RTR1P40084 ARC19YKL013C 516 nt2.58□□□□□ -2
RTR1P40084 PEX17YNL214W 600 nt2.58□□□□□ -2
RTR1P40084 TPT1YOL102C 693 nt2.58□□□□□ -2
RTR1P40084 GPI2YPL076W 843 nt2.58□□□□□ -2
RTR1P40084 YCL001W-AYCL001W-A 462 nt2.58□□□□□ -2
RTR1P40084 TOP2YNL088W 4287 nt2.58□□□□□ -2
RTR1P40084 GYP5YPL249C 2685 nt2.58□□□□□ -2
RTR1P40084 SEN54YPL083C 1404 nt2.58□□□□□ -2
RTR1P40084 FIR1YER032W 2631 nt2.57□□□□□ -2
RTR1P40084 KIP1YBL063W 3336 nt2.57□□□□□ -2
RTR1P40084 RLI1YDR091C 1827 nt2.57□□□□□ -2
RTR1P40084 ISC10YER180C 804 nt2.57□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms