Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XPAP23025 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.09■□□□□ 0.97
XPAP23025 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.09■□□□□ 0.97
XPAP23025 DUX4L16-201ENST00000555130 1264 ntBASIC21.09■□□□□ 0.97
XPAP23025 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.09■□□□□ 0.97
XPAP23025 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
XPAP23025 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XPAP23025 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
XPAP23025 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XPAP23025 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XPAP23025 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
XPAP23025 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
XPAP23025 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
XPAP23025 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.08■□□□□ 0.97
XPAP23025 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.08■□□□□ 0.97
XPAP23025 TERF1P5-201ENST00000477545 1207 ntBASIC21.08■□□□□ 0.97
XPAP23025 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.08■□□□□ 0.97
XPAP23025 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
XPAP23025 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
XPAP23025 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.08■□□□□ 0.96
XPAP23025 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
XPAP23025 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
XPAP23025 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.07■□□□□ 0.96
XPAP23025 AC013268.1-206ENST00000638368 961 ntBASIC21.07■□□□□ 0.96
XPAP23025 AC112229.1-201ENST00000639295 961 ntBASIC21.07■□□□□ 0.96
XPAP23025 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
XPAP23025 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.07■□□□□ 0.96
XPAP23025 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
XPAP23025 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.06■□□□□ 0.96
XPAP23025 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.06■□□□□ 0.96
XPAP23025 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
XPAP23025 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.06■□□□□ 0.96
XPAP23025 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
XPAP23025 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
XPAP23025 MIR663A-201ENST00000385250 93 ntBASIC21.06■□□□□ 0.96
XPAP23025 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.06■□□□□ 0.96
XPAP23025 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.06■□□□□ 0.96
XPAP23025 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.06■□□□□ 0.96
XPAP23025 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
XPAP23025 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.06■□□□□ 0.96
XPAP23025 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
XPAP23025 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
XPAP23025 EP400NL-214ENST00000641289 2402 ntBASIC21.05■□□□□ 0.96
XPAP23025 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
XPAP23025 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.05■□□□□ 0.96
XPAP23025 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.05■□□□□ 0.96
XPAP23025 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.05■□□□□ 0.96
XPAP23025 RAP2CP1-201ENST00000605103 478 ntBASIC21.05■□□□□ 0.96
XPAP23025 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.05■□□□□ 0.96
XPAP23025 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
XPAP23025 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
XPAP23025 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
XPAP23025 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.04■□□□□ 0.96
XPAP23025 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
XPAP23025 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
XPAP23025 AC005181.1-201ENST00000604782 1256 ntBASIC21.04■□□□□ 0.96
XPAP23025 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
XPAP23025 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
XPAP23025 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.04■□□□□ 0.96
XPAP23025 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
XPAP23025 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
XPAP23025 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
XPAP23025 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
XPAP23025 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
XPAP23025 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
XPAP23025 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.04■□□□□ 0.96
XPAP23025 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.03■□□□□ 0.96
XPAP23025 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XPAP23025 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms