Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.29■□□□□ 0.68
NR4A1P22736 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NR4A1P22736 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NR4A1P22736 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
NR4A1P22736 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.28■□□□□ 0.68
NR4A1P22736 LINC01529-204ENST00000636474 1715 ntBASIC19.28■□□□□ 0.68
NR4A1P22736 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR4A1P22736 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NR4A1P22736 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR4A1P22736 MIR638-201ENST00000385237 100 ntBASIC19.28■□□□□ 0.68
NR4A1P22736 DUX4L4-201ENST00000566884 1269 ntBASIC19.28■□□□□ 0.68
NR4A1P22736 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR4A1P22736 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NR4A1P22736 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.28■□□□□ 0.68
NR4A1P22736 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR4A1P22736 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NR4A1P22736 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NR4A1P22736 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.27■□□□□ 0.68
NR4A1P22736 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.27■□□□□ 0.68
NR4A1P22736 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.27■□□□□ 0.68
NR4A1P22736 MIR3181-201ENST00000578512 73 ntBASIC19.27■□□□□ 0.68
NR4A1P22736 AC011298.3-201ENST00000615796 283 ntBASIC19.27■□□□□ 0.68
NR4A1P22736 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NR4A1P22736 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
NR4A1P22736 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
NR4A1P22736 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
NR4A1P22736 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A1P22736 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NR4A1P22736 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.26■□□□□ 0.67
NR4A1P22736 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NR4A1P22736 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
NR4A1P22736 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A1P22736 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.26■□□□□ 0.67
NR4A1P22736 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.26■□□□□ 0.67
NR4A1P22736 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
NR4A1P22736 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR4A1P22736 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.26■□□□□ 0.67
NR4A1P22736 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NR4A1P22736 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NR4A1P22736 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.25■□□□□ 0.67
NR4A1P22736 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
NR4A1P22736 pRNA.6-201ENST00000610482 90 ntBASIC19.25■□□□□ 0.67
NR4A1P22736 pRNA.5-201ENST00000612139 90 ntBASIC19.25■□□□□ 0.67
NR4A1P22736 pRNA.11-201ENST00000618423 90 ntBASIC19.25■□□□□ 0.67
NR4A1P22736 pRNA.13-201ENST00000619112 90 ntBASIC19.25■□□□□ 0.67
NR4A1P22736 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
NR4A1P22736 AC026471.6-201ENST00000622954 1905 ntBASIC19.25■□□□□ 0.67
NR4A1P22736 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR4A1P22736 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A1P22736 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NR4A1P22736 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
NR4A1P22736 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
NR4A1P22736 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A1P22736 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.24■□□□□ 0.67
NR4A1P22736 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.24■□□□□ 0.67
NR4A1P22736 AC005837.3-201ENST00000612163 286 ntBASIC19.24■□□□□ 0.67
NR4A1P22736 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR4A1P22736 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms