Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 ZNRF2P3-201ENST00000424200 374 ntBASIC19.17■□□□□ 0.66
RPS4Y1P22090 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RPS4Y1P22090 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y1P22090 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.17■□□□□ 0.66
RPS4Y1P22090 AC121338.2-201ENST00000622535 1744 ntBASIC19.17■□□□□ 0.66
RPS4Y1P22090 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.16■□□□□ 0.66
RPS4Y1P22090 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.16■□□□□ 0.66
RPS4Y1P22090 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.16■□□□□ 0.66
RPS4Y1P22090 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RPS4Y1P22090 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.16■□□□□ 0.66
RPS4Y1P22090 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y1P22090 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CCDC92B-201ENST00000575506 885 ntBASIC19.15■□□□□ 0.66
RPS4Y1P22090 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 KRT16P2-201ENST00000414673 1423 ntBASIC19.15■□□□□ 0.66
RPS4Y1P22090 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y1P22090 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y1P22090 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4Y1P22090 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4Y1P22090 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4Y1P22090 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS4Y1P22090 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4Y1P22090 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS4Y1P22090 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L2-201ENST00000561772 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 AC104187.1-201ENST00000607510 612 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L6-201ENST00000626483 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L1-201ENST00000627662 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L8-201ENST00000629013 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L3-201ENST00000630187 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L7-201ENST00000630678 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 DUX4L5-201ENST00000630834 1275 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 RARRES2P11-201ENST00000635158 484 ntBASIC19.13■□□□□ 0.65
RPS4Y1P22090 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y1P22090 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RPS4Y1P22090 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms