Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 HUB1YNR032C-A 222 nt1.92□□□□□ -2.1
RPL40BP0CH09 YOR082CYOR082C 342 nt1.92□□□□□ -2.1
RPL40BP0CH09 MCT1YOR221C 1083 nt1.92□□□□□ -2.1
RPL40BP0CH09 SEN54YPL083C 1404 nt1.91□□□□□ -2.1
RPL40BP0CH09 MNT3YIL014W 1893 nt1.91□□□□□ -2.1
RPL40BP0CH09 TAF2YCR042C 4224 nt1.91□□□□□ -2.1
RPL40BP0CH09 YCR007CYCR007C 720 nt1.91□□□□□ -2.1
RPL40BP0CH09 ADH4YGL256W 1149 nt1.91□□□□□ -2.1
RPL40BP0CH09 YGR026WYGR026W 837 nt1.91□□□□□ -2.1
RPL40BP0CH09 YOR097CYOR097C 528 nt1.91□□□□□ -2.1
RPL40BP0CH09 PNT1YOR266W 1272 nt1.91□□□□□ -2.1
RPL40BP0CH09 PIS1YPR113W 663 nt1.91□□□□□ -2.1
RPL40BP0CH09 NOP14YDL148C 2433 nt1.91□□□□□ -2.1
RPL40BP0CH09 SIP3YNL257C 3690 nt1.91□□□□□ -2.1
RPL40BP0CH09 MED1YPR070W 1701 nt1.91□□□□□ -2.1
RPL40BP0CH09 SEF1YBL066C 3447 nt1.91□□□□□ -2.1
RPL40BP0CH09 ORC2YBR060C 1863 nt1.9□□□□□ -2.1
RPL40BP0CH09 YBR138CYBR138C 1575 nt1.9□□□□□ -2.1
RPL40BP0CH09 YCG1YDR325W 3108 nt1.9□□□□□ -2.11
RPL40BP0CH09 ISW1YBR245C 3390 nt1.9□□□□□ -2.11
RPL40BP0CH09 AIM11YER093C-A 414 nt1.9□□□□□ -2.11
RPL40BP0CH09 BUR6YER159C 429 nt1.9□□□□□ -2.11
RPL40BP0CH09 YJL052C-AYJL052C-A 120 nt1.9□□□□□ -2.11
RPL40BP0CH09 INP1YMR204C 1263 nt1.9□□□□□ -2.11
RPL40BP0CH09 DGR1YNL130C-A 147 nt1.9□□□□□ -2.11
RPL40BP0CH09 PFY1YOR122C 381 nt1.9□□□□□ -2.11
RPL40BP0CH09 YBR096WYBR096W 693 nt1.9□□□□□ -2.11
RPL40BP0CH09 SPC72YAL047C 1869 nt1.9□□□□□ -2.11
RPL40BP0CH09 UBP2YOR124C 3819 nt1.89□□□□□ -2.11
RPL40BP0CH09 TRS130YMR218C 3309 nt1.89□□□□□ -2.11
RPL40BP0CH09 YER172C-AYER172C-A 381 nt1.89□□□□□ -2.11
RPL40BP0CH09 RPL36AYMR194W 303 nt1.89□□□□□ -2.11
RPL40BP0CH09 YMR310CYMR310C 954 nt1.89□□□□□ -2.11
RPL40BP0CH09 YAP7YOL028C 738 nt1.89□□□□□ -2.11
RPL40BP0CH09 TOP2YNL088W 4287 nt1.89□□□□□ -2.11
RPL40BP0CH09 YKR015CYKR015C 1707 nt1.88□□□□□ -2.11
RPL40BP0CH09 CTM1YHR109W 1758 nt1.88□□□□□ -2.11
RPL40BP0CH09 MED2YDL005C 1296 nt1.88□□□□□ -2.11
RPL40BP0CH09 GRX3YDR098C 858 nt1.88□□□□□ -2.11
RPL40BP0CH09 RTN1YDR233C 888 nt1.88□□□□□ -2.11
RPL40BP0CH09 RPS25AYGR027C 327 nt1.88□□□□□ -2.11
RPL40BP0CH09 YGR273CYGR273C 525 nt1.88□□□□□ -2.11
RPL40BP0CH09 YIL046W-AYIL046W-A 165 nt1.88□□□□□ -2.11
RPL40BP0CH09 DCG1YIR030C 735 nt1.88□□□□□ -2.11
RPL40BP0CH09 HFM1YGL251C 3564 nt1.88□□□□□ -2.11
RPL40BP0CH09 MGA2YIR033W 3342 nt1.88□□□□□ -2.11
RPL40BP0CH09 TRM3YDL112W 4311 nt1.87□□□□□ -2.11
RPL40BP0CH09 UFD4YKL010C 4452 nt1.87□□□□□ -2.11
RPL40BP0CH09 BSC2YDR275W 708 nt1.87□□□□□ -2.11
RPL40BP0CH09 YHR073W-AYHR073W-A 177 nt1.87□□□□□ -2.11
RPL40BP0CH09 YHR180W-AYHR180W-A 183 nt1.87□□□□□ -2.11
RPL40BP0CH09 LSM8YJR022W 330 nt1.87□□□□□ -2.11
RPL40BP0CH09 YKL071WYKL071W 771 nt1.87□□□□□ -2.11
RPL40BP0CH09 DAD2YKR083C 402 nt1.87□□□□□ -2.11
RPL40BP0CH09 PSY3YLR376C 729 nt1.87□□□□□ -2.11
RPL40BP0CH09 SEC59YMR013C 1560 nt1.87□□□□□ -2.11
RPL40BP0CH09 YKL100CYKL100C 1764 nt1.87□□□□□ -2.11
RPL40BP0CH09 BRE1YDL074C 2103 nt1.87□□□□□ -2.11
RPL40BP0CH09 EAP1YKL204W 1899 nt1.86□□□□□ -2.11
RPL40BP0CH09 ERT1YBR239C 1590 nt1.86□□□□□ -2.11
RPL40BP0CH09 YDR340WYDR340W 303 nt1.86□□□□□ -2.11
RPL40BP0CH09 IKI1YHR187W 930 nt1.86□□□□□ -2.11
RPL40BP0CH09 YIL024CYIL024C 570 nt1.86□□□□□ -2.11
RPL40BP0CH09 CTK2YJL006C 972 nt1.86□□□□□ -2.11
RPL40BP0CH09 YNL203CYNL203C 612 nt1.86□□□□□ -2.11
RPL40BP0CH09 YOR314WYOR314W 330 nt1.86□□□□□ -2.11
RPL40BP0CH09 YFR016CYFR016C 3702 nt1.86□□□□□ -2.11
RPL40BP0CH09 AEP3YPL005W 1821 nt1.86□□□□□ -2.11
RPL40BP0CH09 GYL1YMR192W 2163 nt1.86□□□□□ -2.11
RPL40BP0CH09 ROY1YMR258C 1662 nt1.86□□□□□ -2.11
RPL40BP0CH09 COG4YPR105C 2586 nt1.86□□□□□ -2.11
RPL40BP0CH09 TPO5YKL174C 1857 nt1.86□□□□□ -2.11
RPL40BP0CH09 ECM18YDR125C 1362 nt1.85□□□□□ -2.11
RPL40BP0CH09 CTK1YKL139W 1587 nt1.85□□□□□ -2.11
RPL40BP0CH09 SPH1YLR313C 1593 nt1.85□□□□□ -2.11
RPL40BP0CH09 MUM3YOR298W 1440 nt1.85□□□□□ -2.11
RPL40BP0CH09 YDR261W-BYDR261W-B 5313 nt1.85□□□□□ -2.11
RPL40BP0CH09 YFL002W-AYFL002W-A 5313 nt1.85□□□□□ -2.11
RPL40BP0CH09 YGR161W-BYGR161W-B 5313 nt1.85□□□□□ -2.11
RPL40BP0CH09 YCL019WYCL019W 5313 nt1.85□□□□□ -2.11
RPL40BP0CH09 KHA1YJL094C 2622 nt1.85□□□□□ -2.11
RPL40BP0CH09 YLR422WYLR422W 5799 nt1.85□□□□□ -2.11
RPL40BP0CH09 BRR6YGL247W 594 nt1.85□□□□□ -2.11
RPL40BP0CH09 PRP18YGR006W 756 nt1.85□□□□□ -2.11
RPL40BP0CH09 YGR039WYGR039W 312 nt1.85□□□□□ -2.11
RPL40BP0CH09 CIR1YGR207C 786 nt1.85□□□□□ -2.11
RPL40BP0CH09 YLR076CYLR076C 423 nt1.85□□□□□ -2.11
RPL40BP0CH09 YOR032W-AYOR032W-A 201 nt1.85□□□□□ -2.11
RPL40BP0CH09 HSH49YOR319W 642 nt1.85□□□□□ -2.11
RPL40BP0CH09 CLG1YGL215W 1359 nt1.85□□□□□ -2.11
RPL40BP0CH09 TOR2YKL203C 7425 nt1.84□□□□□ -2.11
RPL40BP0CH09 PIB1YDR313C 861 nt1.84□□□□□ -2.11
RPL40BP0CH09 YLR224WYLR224W 1110 nt1.84□□□□□ -2.11
RPL40BP0CH09 SYC1YOR179C 567 nt1.84□□□□□ -2.11
RPL40BP0CH09 FYV12YOR183W 390 nt1.84□□□□□ -2.11
RPL40BP0CH09 MPD1YOR288C 957 nt1.84□□□□□ -2.11
RPL40BP0CH09 YDL199CYDL199C 2064 nt1.84□□□□□ -2.12
RPL40BP0CH09 NUF2YOL069W 1356 nt1.84□□□□□ -2.12
RPL40BP0CH09 VHR1YIL056W 1923 nt1.83□□□□□ -2.12
RPL40BP0CH09 RLI1YDR091C 1827 nt1.83□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 56.1 ms