Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC27.85■■■□□ 2.05
COL5A2P05997 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.85■■■□□ 2.05
COL5A2P05997 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
COL5A2P05997 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
COL5A2P05997 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL5A2P05997 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL5A2P05997 SAPCD2P1-201ENST00000395413 1184 ntBASIC27.84■■■□□ 2.05
COL5A2P05997 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL5A2P05997 POM121L13P-201ENST00000422362 380 ntBASIC27.84■■■□□ 2.05
COL5A2P05997 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC27.84■■■□□ 2.05
COL5A2P05997 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC27.84■■■□□ 2.05
COL5A2P05997 LINC01023-201ENST00000606054 436 ntBASIC27.84■■■□□ 2.05
COL5A2P05997 AC010331.1-201ENST00000611423 582 ntBASIC27.84■■■□□ 2.05
COL5A2P05997 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
COL5A2P05997 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.84■■■□□ 2.05
COL5A2P05997 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC27.84■■■□□ 2.05
COL5A2P05997 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL5A2P05997 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.84■■■□□ 2.05
COL5A2P05997 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC27.83■■■□□ 2.05
COL5A2P05997 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC27.83■■■□□ 2.05
COL5A2P05997 MFF-205ENST00000354503 1085 ntTSL 2 BASIC27.83■■■□□ 2.05
COL5A2P05997 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
COL5A2P05997 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL5A2P05997 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
COL5A2P05997 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC27.83■■■□□ 2.05
COL5A2P05997 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC27.83■■■□□ 2.05
COL5A2P05997 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.83■■■□□ 2.05
COL5A2P05997 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC27.83■■■□□ 2.05
COL5A2P05997 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
COL5A2P05997 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL5A2P05997 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL5A2P05997 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.04
COL5A2P05997 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
COL5A2P05997 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.83■■■□□ 2.04
COL5A2P05997 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.04
COL5A2P05997 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
COL5A2P05997 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC27.83■■■□□ 2.04
COL5A2P05997 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC27.83■■■□□ 2.04
COL5A2P05997 REXO2-216ENST00000544196 452 ntTSL 3 BASIC27.83■■■□□ 2.04
COL5A2P05997 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.82■■■□□ 2.04
COL5A2P05997 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC27.82■■■□□ 2.04
COL5A2P05997 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 KRT18P68-201ENST00000392293 1000 ntBASIC27.82■■■□□ 2.04
COL5A2P05997 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC27.82■■■□□ 2.04
COL5A2P05997 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.82■■■□□ 2.04
COL5A2P05997 BX088651.1-201ENST00000540551 451 ntBASIC27.82■■■□□ 2.04
COL5A2P05997 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL5A2P05997 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.81■■■□□ 2.04
COL5A2P05997 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
COL5A2P05997 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.81■■■□□ 2.04
COL5A2P05997 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC27.81■■■□□ 2.04
COL5A2P05997 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL5A2P05997 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL5A2P05997 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC27.81■■■□□ 2.04
COL5A2P05997 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27.81■■■□□ 2.04
COL5A2P05997 AC233702.5-201ENST00000584107 538 ntBASIC27.81■■■□□ 2.04
COL5A2P05997 AC105020.6-201ENST00000621523 1217 ntBASIC27.81■■■□□ 2.04
COL5A2P05997 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
COL5A2P05997 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
COL5A2P05997 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.81■■■□□ 2.04
COL5A2P05997 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC27.8■■■□□ 2.04
COL5A2P05997 C11orf96-202ENST00000528572 1834 ntBASIC27.8■■■□□ 2.04
COL5A2P05997 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.8■■■□□ 2.04
COL5A2P05997 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
COL5A2P05997 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
COL5A2P05997 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
COL5A2P05997 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC27.8■■■□□ 2.04
COL5A2P05997 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
COL5A2P05997 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 CRK-204ENST00000574295 1391 ntTSL 5 BASIC27.8■■■□□ 2.04
COL5A2P05997 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 CYP21A1P-202ENST00000354927 1481 ntBASIC27.8■■■□□ 2.04
COL5A2P05997 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL5A2P05997 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.79■■■□□ 2.04
COL5A2P05997 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC27.79■■■□□ 2.04
COL5A2P05997 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL5A2P05997 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.79■■■□□ 2.04
COL5A2P05997 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms