Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.43■□□□□ 0.7
TRIM3O75382 AC006015.1-201ENST00000429970 570 ntBASIC19.43■□□□□ 0.7
TRIM3O75382 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM3O75382 AC137761.2-201ENST00000561729 223 ntBASIC19.43■□□□□ 0.7
TRIM3O75382 AC145350.3-201ENST00000569033 163 ntBASIC19.43■□□□□ 0.7
TRIM3O75382 AC104187.1-201ENST00000607510 612 ntBASIC19.43■□□□□ 0.7
TRIM3O75382 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM3O75382 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM3O75382 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM3O75382 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM3O75382 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM3O75382 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM3O75382 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM3O75382 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM3O75382 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM3O75382 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM3O75382 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM3O75382 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM3O75382 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM3O75382 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM3O75382 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM3O75382 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM3O75382 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
TRIM3O75382 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM3O75382 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 AC004911.1-201ENST00000416316 871 ntBASIC19.4■□□□□ 0.7
TRIM3O75382 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM3O75382 EEF1DP3-203ENST00000566025 782 ntBASIC19.4■□□□□ 0.7
TRIM3O75382 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM3O75382 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM3O75382 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRIM3O75382 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM3O75382 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
TRIM3O75382 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRIM3O75382 AC016769.1-201ENST00000409132 1010 ntBASIC19.39■□□□□ 0.69
TRIM3O75382 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM3O75382 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM3O75382 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM3O75382 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM3O75382 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM3O75382 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM3O75382 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRIM3O75382 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
TRIM3O75382 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM3O75382 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM3O75382 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM3O75382 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM3O75382 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM3O75382 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.38■□□□□ 0.69
TRIM3O75382 AP001160.3-201ENST00000601484 763 ntBASIC19.38■□□□□ 0.69
TRIM3O75382 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM3O75382 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRIM3O75382 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 FBXW4P1-201ENST00000426721 2239 ntBASIC19.37■□□□□ 0.69
TRIM3O75382 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM3O75382 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
TRIM3O75382 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM3O75382 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms