Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
KCNAB3O43448 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNAB3O43448 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
KCNAB3O43448 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
KCNAB3O43448 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.64■□□□□ 0.41
KCNAB3O43448 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.64■□□□□ 0.41
KCNAB3O43448 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
KCNAB3O43448 AC087289.5-201ENST00000586076 3175 ntBASIC17.64■□□□□ 0.41
KCNAB3O43448 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KCNAB3O43448 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.63■□□□□ 0.41
KCNAB3O43448 AC027682.1-201ENST00000562846 899 ntBASIC17.63■□□□□ 0.41
KCNAB3O43448 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.63■□□□□ 0.41
KCNAB3O43448 AC011298.3-201ENST00000615796 283 ntBASIC17.63■□□□□ 0.41
KCNAB3O43448 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
KCNAB3O43448 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KCNAB3O43448 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
KCNAB3O43448 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNAB3O43448 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNAB3O43448 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L2-201ENST00000561772 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 AC008764.7-201ENST00000593779 1081 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L6-201ENST00000626483 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L1-201ENST00000627662 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L8-201ENST00000629013 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L3-201ENST00000630187 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L7-201ENST00000630678 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 DUX4L5-201ENST00000630834 1275 ntBASIC17.62■□□□□ 0.41
KCNAB3O43448 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.62■□□□□ 0.41
KCNAB3O43448 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.62■□□□□ 0.41
KCNAB3O43448 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KCNAB3O43448 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNAB3O43448 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNAB3O43448 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNAB3O43448 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNAB3O43448 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.61■□□□□ 0.41
KCNAB3O43448 pRNA.6-201ENST00000610482 90 ntBASIC17.61■□□□□ 0.41
KCNAB3O43448 pRNA.5-201ENST00000612139 90 ntBASIC17.61■□□□□ 0.41
KCNAB3O43448 pRNA.11-201ENST00000618423 90 ntBASIC17.61■□□□□ 0.41
KCNAB3O43448 pRNA.13-201ENST00000619112 90 ntBASIC17.61■□□□□ 0.41
KCNAB3O43448 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.61■□□□□ 0.41
KCNAB3O43448 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KCNAB3O43448 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
KCNAB3O43448 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KCNAB3O43448 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.61■□□□□ 0.41
KCNAB3O43448 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
KCNAB3O43448 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.6■□□□□ 0.41
KCNAB3O43448 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 SERBP1P1-201ENST00000396021 1160 ntBASIC17.6■□□□□ 0.41
KCNAB3O43448 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.6■□□□□ 0.41
KCNAB3O43448 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.6■□□□□ 0.41
KCNAB3O43448 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNAB3O43448 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
KCNAB3O43448 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.6■□□□□ 0.41
KCNAB3O43448 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNAB3O43448 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms