Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLOCKO15516 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CLOCKO15516 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLOCKO15516 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.77■□□□□ 0.76
CLOCKO15516 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLOCKO15516 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
CLOCKO15516 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.76■□□□□ 0.75
CLOCKO15516 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.76■□□□□ 0.75
CLOCKO15516 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CLOCKO15516 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLOCKO15516 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.76■□□□□ 0.75
CLOCKO15516 AC106739.1-201ENST00000617035 715 ntBASIC19.76■□□□□ 0.75
CLOCKO15516 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLOCKO15516 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.76■□□□□ 0.75
CLOCKO15516 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.76■□□□□ 0.75
CLOCKO15516 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CLOCKO15516 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.75■□□□□ 0.75
CLOCKO15516 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CLOCKO15516 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 AP005212.1-201ENST00000581547 1997 ntBASIC19.75■□□□□ 0.75
CLOCKO15516 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLOCKO15516 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.75■□□□□ 0.75
CLOCKO15516 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.75■□□□□ 0.75
CLOCKO15516 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CLOCKO15516 AC135279.3-201ENST00000610945 1311 ntBASIC19.75■□□□□ 0.75
CLOCKO15516 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLOCKO15516 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLOCKO15516 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.74■□□□□ 0.75
CLOCKO15516 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.74■□□□□ 0.75
CLOCKO15516 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.74■□□□□ 0.75
CLOCKO15516 AC133561.4-201ENST00000566112 224 ntBASIC19.74■□□□□ 0.75
CLOCKO15516 AC142381.2-201ENST00000566120 298 ntBASIC19.74■□□□□ 0.75
CLOCKO15516 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
CLOCKO15516 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLOCKO15516 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLOCKO15516 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLOCKO15516 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.73■□□□□ 0.75
CLOCKO15516 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLOCKO15516 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.73■□□□□ 0.75
CLOCKO15516 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLOCKO15516 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.73■□□□□ 0.75
CLOCKO15516 AC241377.3-202ENST00000626088 1088 ntBASIC19.73■□□□□ 0.75
CLOCKO15516 AC241585.3-202ENST00000628937 1088 ntBASIC19.73■□□□□ 0.75
CLOCKO15516 AC245100.8-202ENST00000629247 1058 ntBASIC19.73■□□□□ 0.75
CLOCKO15516 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.73■□□□□ 0.75
CLOCKO15516 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.73■□□□□ 0.75
CLOCKO15516 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLOCKO15516 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.73■□□□□ 0.75
CLOCKO15516 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.72■□□□□ 0.75
CLOCKO15516 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
CLOCKO15516 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.72■□□□□ 0.75
CLOCKO15516 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.72■□□□□ 0.75
CLOCKO15516 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLOCKO15516 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.72■□□□□ 0.75
CLOCKO15516 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.72■□□□□ 0.75
CLOCKO15516 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.72■□□□□ 0.75
CLOCKO15516 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.72■□□□□ 0.75
CLOCKO15516 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLOCKO15516 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLOCKO15516 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
CLOCKO15516 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CLOCKO15516 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
CLOCKO15516 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
CLOCKO15516 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.71■□□□□ 0.75
CLOCKO15516 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLOCKO15516 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms