Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SMAD9O15198 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SMAD9O15198 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.92■□□□□ 0.62
SMAD9O15198 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD9O15198 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD9O15198 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD9O15198 AC104564.3-201ENST00000582367 638 ntBASIC18.92■□□□□ 0.62
SMAD9O15198 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.92■□□□□ 0.62
SMAD9O15198 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SMAD9O15198 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SMAD9O15198 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMAD9O15198 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.92■□□□□ 0.62
SMAD9O15198 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD9O15198 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SMAD9O15198 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SMAD9O15198 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.91■□□□□ 0.62
SMAD9O15198 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD9O15198 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.91■□□□□ 0.62
SMAD9O15198 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.91■□□□□ 0.62
SMAD9O15198 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 AC092666.2-201ENST00000613287 246 ntBASIC18.91■□□□□ 0.62
SMAD9O15198 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMAD9O15198 FBXW4P1-201ENST00000426721 2239 ntBASIC18.9■□□□□ 0.62
SMAD9O15198 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SMAD9O15198 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.9■□□□□ 0.62
SMAD9O15198 KRT19P1-201ENST00000405746 1186 ntBASIC18.9■□□□□ 0.62
SMAD9O15198 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.9■□□□□ 0.62
SMAD9O15198 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMAD9O15198 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
SMAD9O15198 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMAD9O15198 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.89■□□□□ 0.62
SMAD9O15198 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMAD9O15198 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.89■□□□□ 0.61
SMAD9O15198 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.89■□□□□ 0.61
SMAD9O15198 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.89■□□□□ 0.61
SMAD9O15198 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.89■□□□□ 0.61
SMAD9O15198 AC138907.5-202ENST00000569484 235 ntBASIC18.89■□□□□ 0.61
SMAD9O15198 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SMAD9O15198 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.89■□□□□ 0.61
SMAD9O15198 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.89■□□□□ 0.61
SMAD9O15198 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.89■□□□□ 0.61
SMAD9O15198 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMAD9O15198 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SMAD9O15198 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 AC010141.2-201ENST00000452426 721 ntBASIC18.88■□□□□ 0.61
SMAD9O15198 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD9O15198 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD9O15198 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD9O15198 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMAD9O15198 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.88■□□□□ 0.61
SMAD9O15198 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.87■□□□□ 0.61
SMAD9O15198 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SMAD9O15198 AP001160.3-201ENST00000601484 763 ntBASIC18.87■□□□□ 0.61
SMAD9O15198 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms