Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV12-1A0A0B4J245 AC005703.6-201ENST00000623265 1329 ntBASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV12-1A0A0B4J245 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 ABHD17AP4-201ENST00000411545 909 ntBASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 GPX1-201ENST00000419349 1106 ntBASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV12-1A0A0B4J245 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 AC099778.1-201ENST00000568593 1911 ntBASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 AL031602.1-201ENST00000633169 911 ntBASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAV12-1A0A0B4J245 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 AL512408.1-201ENST00000569378 2000 ntBASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 AC116562.4-201ENST00000641316 2276 ntBASIC14.64□□□□□ -0.07
TRAV12-1A0A0B4J245 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms