Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PLK5-205ENST00000642079 1969 ntBASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 KRT18P61-201ENST00000585825 1298 ntBASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AC104187.1-201ENST00000607510 612 ntBASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AL157384.1-201ENST00000445995 2473 ntBASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AC004854.2-201ENST00000608450 1441 ntBASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.47■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AP004607.4-201ENST00000530158 1459 ntBASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.46■□□□□ 0.55
IGKV1D-43A0A0B4J1Z2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC010141.2-201ENST00000452426 721 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L2-201ENST00000561772 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L6-201ENST00000626483 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L1-201ENST00000627662 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L8-201ENST00000629013 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L3-201ENST00000630187 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L7-201ENST00000630678 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 DUX4L5-201ENST00000630834 1275 ntBASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
IGKV1D-43A0A0B4J1Z2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms