Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-1A0A075B5Z8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Fst-202ENSMUST00000223640 2612 ntBASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav6-1A0A075B5Z8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6-1A0A075B5Z8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Tgds-204ENSMUST00000228543 1594 ntBASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav6-1A0A075B5Z8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-1A0A075B5Z8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-1A0A075B5Z8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-1A0A075B5Z8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav6-1A0A075B5Z8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Mir7075-201ENSMUST00000184187 82 ntBASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm43173-201ENSMUST00000202246 593 ntBASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav6-1A0A075B5Z8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.69□□□□□ -0.06
Trav6-1A0A075B5Z8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms