Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
MLH3Q9UHC1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
MLH3Q9UHC1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
MLH3Q9UHC1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.53■■■□□ 2.64
MLH3Q9UHC1 CDV3P1-201ENST00000471403 739 ntBASIC31.53■■■□□ 2.64
MLH3Q9UHC1 AC233702.5-201ENST00000584107 538 ntBASIC31.53■■■□□ 2.64
MLH3Q9UHC1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
MLH3Q9UHC1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
MLH3Q9UHC1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.52■■■□□ 2.64
MLH3Q9UHC1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 OR2A1-AS1-207ENST00000486094 819 ntBASIC31.52■■■□□ 2.64
MLH3Q9UHC1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.52■■■□□ 2.64
MLH3Q9UHC1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
MLH3Q9UHC1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 POM121L13P-201ENST00000422362 380 ntBASIC31.51■■■□□ 2.63
MLH3Q9UHC1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.51■■■□□ 2.63
MLH3Q9UHC1 REXO1L12P-201ENST00000622156 912 ntBASIC31.51■■■□□ 2.63
MLH3Q9UHC1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 AC003102.1-202ENST00000563394 1796 ntBASIC31.5■■■□□ 2.63
MLH3Q9UHC1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
MLH3Q9UHC1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 AC245052.3-201ENST00000450182 901 ntBASIC31.49■■■□□ 2.63
MLH3Q9UHC1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MLH3Q9UHC1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
MLH3Q9UHC1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
MLH3Q9UHC1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
MLH3Q9UHC1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
MLH3Q9UHC1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
MLH3Q9UHC1 AC139530.1-201ENST00000575312 1977 ntBASIC31.47■■■□□ 2.63
MLH3Q9UHC1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
MLH3Q9UHC1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.45■■■□□ 2.63
MLH3Q9UHC1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
MLH3Q9UHC1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.45■■■□□ 2.63
MLH3Q9UHC1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
MLH3Q9UHC1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC31.45■■■□□ 2.62
MLH3Q9UHC1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.45■■■□□ 2.62
MLH3Q9UHC1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC31.45■■■□□ 2.62
MLH3Q9UHC1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.45■■■□□ 2.62
MLH3Q9UHC1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
MLH3Q9UHC1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms