Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
VRK1Q99986 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.41■□□□□ 0.54
VRK1Q99986 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VRK1Q99986 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.41■□□□□ 0.54
VRK1Q99986 AC092437.1-201ENST00000624794 1048 ntBASIC18.41■□□□□ 0.54
VRK1Q99986 RARRES2P11-201ENST00000635158 484 ntBASIC18.41■□□□□ 0.54
VRK1Q99986 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
VRK1Q99986 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
VRK1Q99986 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VRK1Q99986 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VRK1Q99986 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
VRK1Q99986 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
VRK1Q99986 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK1Q99986 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK1Q99986 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 AC079140.4-201ENST00000507448 529 ntBASIC18.4■□□□□ 0.54
VRK1Q99986 AC090192.1-201ENST00000517740 490 ntBASIC18.4■□□□□ 0.54
VRK1Q99986 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 AC137761.2-201ENST00000561729 223 ntBASIC18.4■□□□□ 0.54
VRK1Q99986 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.4■□□□□ 0.54
VRK1Q99986 AC145350.3-201ENST00000569033 163 ntBASIC18.4■□□□□ 0.54
VRK1Q99986 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.4■□□□□ 0.54
VRK1Q99986 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.4■□□□□ 0.54
VRK1Q99986 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VRK1Q99986 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.39■□□□□ 0.54
VRK1Q99986 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
VRK1Q99986 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.39■□□□□ 0.53
VRK1Q99986 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.39■□□□□ 0.53
VRK1Q99986 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.39■□□□□ 0.53
VRK1Q99986 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VRK1Q99986 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VRK1Q99986 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VRK1Q99986 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.38■□□□□ 0.53
VRK1Q99986 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.38■□□□□ 0.53
VRK1Q99986 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.38■□□□□ 0.53
VRK1Q99986 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.38■□□□□ 0.53
VRK1Q99986 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
VRK1Q99986 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 AC004854.2-201ENST00000608450 1441 ntBASIC18.38■□□□□ 0.53
VRK1Q99986 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
VRK1Q99986 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.38■□□□□ 0.53
VRK1Q99986 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
VRK1Q99986 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK1Q99986 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
VRK1Q99986 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.37■□□□□ 0.53
VRK1Q99986 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK1Q99986 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.37■□□□□ 0.53
VRK1Q99986 AC079089.2-201ENST00000531211 1277 ntBASIC18.37■□□□□ 0.53
VRK1Q99986 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK1Q99986 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 AC009237.3-201ENST00000393279 1427 ntBASIC18.37■□□□□ 0.53
VRK1Q99986 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
VRK1Q99986 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK1Q99986 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.37■□□□□ 0.53
VRK1Q99986 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.37■□□□□ 0.53
VRK1Q99986 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VRK1Q99986 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
VRK1Q99986 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VRK1Q99986 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.36■□□□□ 0.53
VRK1Q99986 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VRK1Q99986 KRT19P1-201ENST00000405746 1186 ntBASIC18.36■□□□□ 0.53
VRK1Q99986 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VRK1Q99986 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms