Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 KRT18P29-201ENST00000397031 1267 ntBASIC21.04■□□□□ 0.96
SIPA1Q96FS4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 AC245052.3-201ENST00000450182 901 ntBASIC21.04■□□□□ 0.96
SIPA1Q96FS4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 C9orf163-202ENST00000624034 2573 ntBASIC21.04■□□□□ 0.96
SIPA1Q96FS4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SIPA1Q96FS4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 DUSP5P2-201ENST00000426873 1033 ntBASIC21.03■□□□□ 0.96
SIPA1Q96FS4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ITM2C-210ENST00000620962 501 ntBASIC21.03■□□□□ 0.96
SIPA1Q96FS4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIPA1Q96FS4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 AC010542.4-201ENST00000563151 1910 ntBASIC21.02■□□□□ 0.96
SIPA1Q96FS4 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.02■□□□□ 0.96
SIPA1Q96FS4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIPA1Q96FS4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SIPA1Q96FS4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SIPA1Q96FS4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 LSM12P1-201ENST00000411836 588 ntBASIC21.01■□□□□ 0.95
SIPA1Q96FS4 AC091799.1-201ENST00000422823 811 ntBASIC21.01■□□□□ 0.95
SIPA1Q96FS4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIPA1Q96FS4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SIPA1Q96FS4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 C11orf96-202ENST00000528572 1834 ntBASIC21■□□□□ 0.95
SIPA1Q96FS4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21■□□□□ 0.95
SIPA1Q96FS4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21■□□□□ 0.95
SIPA1Q96FS4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIPA1Q96FS4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SIPA1Q96FS4 CDV3P1-201ENST00000471403 739 ntBASIC21■□□□□ 0.95
SIPA1Q96FS4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21■□□□□ 0.95
SIPA1Q96FS4 AC008687.6-201ENST00000596318 630 ntBASIC21■□□□□ 0.95
SIPA1Q96FS4 FAM21FP-204ENST00000608637 956 ntBASIC21■□□□□ 0.95
SIPA1Q96FS4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21■□□□□ 0.95
SIPA1Q96FS4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SIPA1Q96FS4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SIPA1Q96FS4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21■□□□□ 0.95
SIPA1Q96FS4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.99■□□□□ 0.95
SIPA1Q96FS4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 FAM99A-202ENST00000538190 1989 ntBASIC20.99■□□□□ 0.95
SIPA1Q96FS4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.99■□□□□ 0.95
SIPA1Q96FS4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIPA1Q96FS4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms