Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
APH1AQ96BI3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APH1AQ96BI3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.58■□□□□ 0.57
APH1AQ96BI3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.58■□□□□ 0.57
APH1AQ96BI3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APH1AQ96BI3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
APH1AQ96BI3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APH1AQ96BI3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
APH1AQ96BI3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
APH1AQ96BI3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.58■□□□□ 0.57
APH1AQ96BI3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 SLC7A5P1-201ENST00000568957 537 ntBASIC18.58■□□□□ 0.56
APH1AQ96BI3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
APH1AQ96BI3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.58■□□□□ 0.56
APH1AQ96BI3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 AC244015.2-201ENST00000616358 1861 ntBASIC18.57■□□□□ 0.56
APH1AQ96BI3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 AC011767.1-201ENST00000617410 1153 ntBASIC18.57■□□□□ 0.56
APH1AQ96BI3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
APH1AQ96BI3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
APH1AQ96BI3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 MFSD11-216ENST00000590393 1141 ntBASIC18.56■□□□□ 0.56
APH1AQ96BI3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 AC080038.1-201ENST00000611274 1154 ntBASIC18.56■□□□□ 0.56
APH1AQ96BI3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
APH1AQ96BI3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.56■□□□□ 0.56
APH1AQ96BI3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APH1AQ96BI3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APH1AQ96BI3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APH1AQ96BI3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
APH1AQ96BI3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms