Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
TMEM40Q8WWA1 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
TMEM40Q8WWA1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TMEM40Q8WWA1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 AC091874.3-201ENST00000512672 1195 ntBASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
TMEM40Q8WWA1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TMEM40Q8WWA1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 DUSP5P2-201ENST00000426873 1033 ntBASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 FAM201B-201ENST00000458407 597 ntBASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TMEM40Q8WWA1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 AC242852.2-201ENST00000615738 1807 ntBASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 POU5F1P3-201ENST00000428824 1078 ntBASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 AC245052.3-201ENST00000450182 901 ntBASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
TMEM40Q8WWA1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 AL355472.2-201ENST00000422958 438 ntBASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
TMEM40Q8WWA1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms