Protein–RNA interactions for Protein: Q6ZWI9

RFPL4B, Ret finger protein-like 4B, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4BQ6ZWI9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 AC105233.4-201ENST00000642045 216 ntBASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 C11orf96-202ENST00000528572 1834 ntBASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RFPL4BQ6ZWI9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFPL4BQ6ZWI9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RFPL4BQ6ZWI9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 ZNRF2P3-201ENST00000424200 374 ntBASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFPL4BQ6ZWI9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 AC092053.2-201ENST00000640557 1818 ntBASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFPL4BQ6ZWI9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 AC012414.1-201ENST00000556676 535 ntBASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.62■□□□□ 0.57
RFPL4BQ6ZWI9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 IRS3P-201ENST00000223076 1006 ntBASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RFPL4BQ6ZWI9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 MIR6084-201ENST00000622012 110 ntBASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RFPL4BQ6ZWI9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms