Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.41■□□□□ 0.22
CFHR3Q02985 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CFHR3Q02985 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CFHR3Q02985 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.41■□□□□ 0.22
CFHR3Q02985 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.4■□□□□ 0.22
CFHR3Q02985 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.4■□□□□ 0.22
CFHR3Q02985 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.4■□□□□ 0.22
CFHR3Q02985 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CFHR3Q02985 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.4■□□□□ 0.22
CFHR3Q02985 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CFHR3Q02985 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.4■□□□□ 0.22
CFHR3Q02985 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
CFHR3Q02985 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CFHR3Q02985 AC244015.2-201ENST00000616358 1861 ntBASIC16.39■□□□□ 0.22
CFHR3Q02985 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFHR3Q02985 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.39■□□□□ 0.21
CFHR3Q02985 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.39■□□□□ 0.21
CFHR3Q02985 CNN2P6-201ENST00000439038 900 ntBASIC16.39■□□□□ 0.21
CFHR3Q02985 TERF1P5-201ENST00000477545 1207 ntBASIC16.39■□□□□ 0.21
CFHR3Q02985 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.39■□□□□ 0.21
CFHR3Q02985 AC243732.1-201ENST00000612648 864 ntBASIC16.39■□□□□ 0.21
CFHR3Q02985 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.39■□□□□ 0.21
CFHR3Q02985 AC231657.2-201ENST00000624556 255 ntBASIC16.39■□□□□ 0.21
CFHR3Q02985 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFHR3Q02985 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CFHR3Q02985 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.39■□□□□ 0.21
CFHR3Q02985 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CFHR3Q02985 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CFHR3Q02985 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.38■□□□□ 0.21
CFHR3Q02985 RBM17P2-201ENST00000616397 1405 ntBASIC16.38■□□□□ 0.21
CFHR3Q02985 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.38■□□□□ 0.21
CFHR3Q02985 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 AC026185.1-201ENST00000445748 174 ntBASIC16.38■□□□□ 0.21
CFHR3Q02985 AC007322.4-201ENST00000509611 723 ntBASIC16.38■□□□□ 0.21
CFHR3Q02985 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.38■□□□□ 0.21
CFHR3Q02985 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CFHR3Q02985 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.38■□□□□ 0.21
CFHR3Q02985 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CFHR3Q02985 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CFHR3Q02985 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CFHR3Q02985 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.37■□□□□ 0.21
CFHR3Q02985 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.37■□□□□ 0.21
CFHR3Q02985 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CFHR3Q02985 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.37■□□□□ 0.21
CFHR3Q02985 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CFHR3Q02985 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.37■□□□□ 0.21
CFHR3Q02985 AC013268.1-206ENST00000638368 961 ntBASIC16.37■□□□□ 0.21
CFHR3Q02985 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.37■□□□□ 0.21
CFHR3Q02985 AC112229.1-201ENST00000639295 961 ntBASIC16.37■□□□□ 0.21
CFHR3Q02985 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.37■□□□□ 0.21
CFHR3Q02985 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CFHR3Q02985 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CFHR3Q02985 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CFHR3Q02985 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms