Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.9■□□□□ 0.78
SKP1P63208 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
SKP1P63208 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
SKP1P63208 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.9■□□□□ 0.78
SKP1P63208 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SKP1P63208 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
SKP1P63208 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SKP1P63208 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SKP1P63208 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.89■□□□□ 0.77
SKP1P63208 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKP1P63208 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKP1P63208 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SKP1P63208 FBXW4P1-201ENST00000426721 2239 ntBASIC19.89■□□□□ 0.77
SKP1P63208 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKP1P63208 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.89■□□□□ 0.77
SKP1P63208 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SKP1P63208 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.89■□□□□ 0.77
SKP1P63208 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.89■□□□□ 0.77
SKP1P63208 AC092666.2-201ENST00000613287 246 ntBASIC19.89■□□□□ 0.77
SKP1P63208 BID-214ENST00000617586 542 ntTSL 5 BASIC19.89■□□□□ 0.77
SKP1P63208 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.89■□□□□ 0.77
SKP1P63208 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SKP1P63208 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
SKP1P63208 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SKP1P63208 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.88■□□□□ 0.77
SKP1P63208 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.88■□□□□ 0.77
SKP1P63208 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.88■□□□□ 0.77
SKP1P63208 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.88■□□□□ 0.77
SKP1P63208 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.88■□□□□ 0.77
SKP1P63208 UBE2DNL-204ENST00000602536 740 ntBASIC19.88■□□□□ 0.77
SKP1P63208 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
SKP1P63208 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.88■□□□□ 0.77
SKP1P63208 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.88■□□□□ 0.77
SKP1P63208 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.88■□□□□ 0.77
SKP1P63208 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SKP1P63208 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
SKP1P63208 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.87■□□□□ 0.77
SKP1P63208 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.87■□□□□ 0.77
SKP1P63208 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.87■□□□□ 0.77
SKP1P63208 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.87■□□□□ 0.77
SKP1P63208 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.87■□□□□ 0.77
SKP1P63208 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.87■□□□□ 0.77
SKP1P63208 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.87■□□□□ 0.77
SKP1P63208 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.87■□□□□ 0.77
SKP1P63208 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SKP1P63208 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SKP1P63208 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SKP1P63208 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
SKP1P63208 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.86■□□□□ 0.77
SKP1P63208 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.86■□□□□ 0.77
SKP1P63208 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.86■□□□□ 0.77
SKP1P63208 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SKP1P63208 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms