Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS4XP62701 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS4XP62701 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
RPS4XP62701 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.93■□□□□ 0.62
RPS4XP62701 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.93■□□□□ 0.62
RPS4XP62701 AC090192.1-201ENST00000517740 490 ntBASIC18.93■□□□□ 0.62
RPS4XP62701 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.93■□□□□ 0.62
RPS4XP62701 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS4XP62701 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS4XP62701 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS4XP62701 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPS4XP62701 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4XP62701 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 CCDC92B-201ENST00000575506 885 ntBASIC18.92■□□□□ 0.62
RPS4XP62701 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.92■□□□□ 0.62
RPS4XP62701 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RPS4XP62701 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS4XP62701 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4XP62701 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.92■□□□□ 0.62
RPS4XP62701 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
RPS4XP62701 LINC02228-203ENST00000641970 1355 ntBASIC18.92■□□□□ 0.62
RPS4XP62701 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPS4XP62701 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4XP62701 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS4XP62701 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.91■□□□□ 0.62
RPS4XP62701 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS4XP62701 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPS4XP62701 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4XP62701 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.91■□□□□ 0.62
RPS4XP62701 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS4XP62701 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
RPS4XP62701 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS4XP62701 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.9■□□□□ 0.62
RPS4XP62701 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS4XP62701 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS4XP62701 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RPS4XP62701 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.89■□□□□ 0.62
RPS4XP62701 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4XP62701 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS4XP62701 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
RPS4XP62701 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS4XP62701 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RPS4XP62701 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RPS4XP62701 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS4XP62701 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RPS4XP62701 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.89■□□□□ 0.61
RPS4XP62701 KRT18P14-201ENST00000534205 1250 ntBASIC18.89■□□□□ 0.61
RPS4XP62701 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
RPS4XP62701 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RPS4XP62701 TPRG1LP1-201ENST00000598702 760 ntBASIC18.89■□□□□ 0.61
RPS4XP62701 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.89■□□□□ 0.61
RPS4XP62701 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RPS4XP62701 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS4XP62701 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
RPS4XP62701 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RPS4XP62701 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4XP62701 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4XP62701 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.88■□□□□ 0.61
RPS4XP62701 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4XP62701 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS4XP62701 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS4XP62701 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.88■□□□□ 0.61
RPS4XP62701 NTF6G-201ENST00000591094 616 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms