Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YJR087WYJR087W 351 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 SRP21YKL122C 504 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 RLP24YLR009W 600 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 MPP6YNR024W 561 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 NIP7YPL211W 546 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 YBR071WYBR071W 636 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 CUR1YPR158W 759 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 YPR170CYPR170C 336 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 ASI3YNL008C 2031 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 MAK5YBR142W 2322 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 YDR061WYDR061W 1620 nt3.37□□□□□ -1.87
TY2A-LR1P0C2J4 PWP2YCR057C 2772 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 DAN4YJR151C 3486 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 CRD1YDL142C 852 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 YDL163WYDL163W 303 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 MVB12YGR206W 306 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 RPL17BYJL177W 555 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 BUD19YJL188C 309 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 YLR257WYLR257W 966 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 VPS63YLR261C 327 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 VPS20YMR077C 666 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 YMR254CYMR254C 309 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 YNL235CYNL235C 432 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 ATX1YNL259C 222 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 ELM1YKL048C 1923 nt3.36□□□□□ -1.87
TY2A-LR1P0C2J4 FRE8YLR047C 2061 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 BYE1YKL005C 1785 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 HFM1YGL251C 3564 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 MUS81YDR386W 1899 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YDR018CYDR018C 1191 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 CPR5YDR304C 678 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 PRE1YER012W 597 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 RTT105YER104W 627 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YFR054CYFR054C 579 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 LIF1YGL090W 1266 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 GEP4YHR100C 558 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YHR214C-DYHR214C-D 294 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 APQ13YJL075C 417 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YAR069CYAR069C 294 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 DYN3YMR299C 939 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YBR300CYBR300C 498 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 CHS3YBR023C 3498 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 YDR210W-AYDR210W-A 1317 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 URA2YJL130C 6645 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 RIM13YMR154C 2184 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 OSH3YHR073W 2991 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 JEN1YKL217W 1851 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 ZDS1YMR273C 2748 nt3.35□□□□□ -1.87
TY2A-LR1P0C2J4 ZDS2YML109W 2829 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 KRI1YNL308C 1776 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 RPA14YDR156W 414 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 YDR526CYDR526C 471 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 YGR293CYGR293C 462 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 PRS3YHL011C 963 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 PCL5YHR071W 690 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 YIL046W-AYIL046W-A 165 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 IST3YIR005W 447 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 STE18YJR086W 333 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 IMP1YMR150C 573 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 YMR187CYMR187C 1296 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 ARF3YOR094W 552 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 AFT2YPL202C 1251 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 SEC66YBR171W 621 nt3.34□□□□□ -1.87
TY2A-LR1P0C2J4 21S_rRNA21S_rRNA 3296 nt3.34□□□□□ -1.88
TY2A-LR1P0C2J4 VBA4YDR119W 2307 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 DAD1YDR016C 285 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RPS8BYER102W 603 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RPL11BYGR085C 525 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 ASG7YJL170C 630 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RPL16BYNL069C 597 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RPS8AYBL072C 603 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 PDR17YNL264C 1053 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RSM19YNR037C 276 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 RPL11AYPR102C 525 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 ETP1YHL010C 1758 nt3.33□□□□□ -1.88
TY2A-LR1P0C2J4 PDS5YMR076C 3834 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 MSH4YFL003C 2637 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 REG1YDR028C 3045 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 EMI1YDR512C 564 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 PEA2YER149C 1263 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 LRP1YHR081W 555 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 YJR141WYJR141W 1044 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 RPL13BYMR142C 600 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 HHF2YNL030W 312 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 MEI5YPL121C 669 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 YPR172WYPR172W 603 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 NOP12YOL041C 1380 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 RAD5YLR032W 3510 nt3.32□□□□□ -1.88
TY2A-LR1P0C2J4 VHR1YIL056W 1923 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 GPI10YGL142C 1851 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 MIG3YER028C 1185 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 MIC19YFR011C 513 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 CDC26YFR036W 375 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 VEL1YGL258W 621 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 SLX9YGR081C 633 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 INP1YMR204C 1263 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 TIR2YOR010C 756 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 YPL107WYPL107W 747 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 MRPS9YBR146W 837 nt3.31□□□□□ -1.88
TY2A-LR1P0C2J4 CWH41YGL027C 2502 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 38.7 ms