Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FAM21FP-204ENST00000608637 956 ntBASIC26.88■■□□□ 1.89
SNRPA1P09661 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
SNRPA1P09661 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SNRPA1P09661 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SNRPA1P09661 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
SNRPA1P09661 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.87■■□□□ 1.89
SNRPA1P09661 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.87■■□□□ 1.89
SNRPA1P09661 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
SNRPA1P09661 POU5F1P3-201ENST00000428824 1078 ntBASIC26.87■■□□□ 1.89
SNRPA1P09661 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.87■■□□□ 1.89
SNRPA1P09661 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.87■■□□□ 1.89
SNRPA1P09661 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.87■■□□□ 1.89
SNRPA1P09661 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SNRPA1P09661 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.87■■□□□ 1.89
SNRPA1P09661 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNRPA1P09661 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
SNRPA1P09661 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNRPA1P09661 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.86■■□□□ 1.89
SNRPA1P09661 DUSP5P2-201ENST00000426873 1033 ntBASIC26.86■■□□□ 1.89
SNRPA1P09661 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
SNRPA1P09661 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
SNRPA1P09661 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.86■■□□□ 1.89
SNRPA1P09661 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.86■■□□□ 1.89
SNRPA1P09661 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SNRPA1P09661 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.86■■□□□ 1.89
SNRPA1P09661 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.85■■□□□ 1.89
SNRPA1P09661 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
SNRPA1P09661 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.85■■□□□ 1.89
SNRPA1P09661 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC26.85■■□□□ 1.89
SNRPA1P09661 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.85■■□□□ 1.89
SNRPA1P09661 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.85■■□□□ 1.89
SNRPA1P09661 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.85■■□□□ 1.89
SNRPA1P09661 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.85■■□□□ 1.89
SNRPA1P09661 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.85■■□□□ 1.89
SNRPA1P09661 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SNRPA1P09661 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.85■■□□□ 1.89
SNRPA1P09661 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
SNRPA1P09661 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.84■■□□□ 1.89
SNRPA1P09661 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.84■■□□□ 1.89
SNRPA1P09661 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.84■■□□□ 1.89
SNRPA1P09661 CDV3P1-201ENST00000471403 739 ntBASIC26.84■■□□□ 1.89
SNRPA1P09661 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.84■■□□□ 1.89
SNRPA1P09661 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.84■■□□□ 1.89
SNRPA1P09661 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.84■■□□□ 1.89
SNRPA1P09661 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SNRPA1P09661 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRPA1P09661 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.83■■□□□ 1.89
SNRPA1P09661 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.83■■□□□ 1.89
SNRPA1P09661 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SNRPA1P09661 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.83■■□□□ 1.89
SNRPA1P09661 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.83■■□□□ 1.89
SNRPA1P09661 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.83■■□□□ 1.89
SNRPA1P09661 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC26.83■■□□□ 1.89
SNRPA1P09661 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 TERT-206ENST00000508104 2486 ntTSL 5 BASIC26.83■■□□□ 1.89
SNRPA1P09661 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SNRPA1P09661 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.83■■□□□ 1.88
SNRPA1P09661 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.82■■□□□ 1.88
SNRPA1P09661 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.82■■□□□ 1.88
SNRPA1P09661 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
SNRPA1P09661 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
SNRPA1P09661 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.82■■□□□ 1.88
SNRPA1P09661 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.82■■□□□ 1.88
SNRPA1P09661 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
SNRPA1P09661 AC100791.3-201ENST00000617619 330 ntBASIC26.82■■□□□ 1.88
SNRPA1P09661 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
SNRPA1P09661 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
SNRPA1P09661 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
SNRPA1P09661 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRPA1P09661 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
SNRPA1P09661 AC242852.2-201ENST00000615738 1807 ntBASIC26.81■■□□□ 1.88
SNRPA1P09661 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
SNRPA1P09661 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
SNRPA1P09661 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC26.81■■□□□ 1.88
SNRPA1P09661 ITM2C-210ENST00000620962 501 ntBASIC26.81■■□□□ 1.88
SNRPA1P09661 AC066615.1-201ENST00000640911 628 ntBASIC26.81■■□□□ 1.88
SNRPA1P09661 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms