Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TSPAN3O60637 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TSPAN3O60637 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TSPAN3O60637 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TSPAN3O60637 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.64■■□□□ 1.06
TSPAN3O60637 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.06
TSPAN3O60637 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.64■■□□□ 1.05
TSPAN3O60637 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.64■■□□□ 1.05
TSPAN3O60637 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.64■■□□□ 1.05
TSPAN3O60637 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.64■■□□□ 1.05
TSPAN3O60637 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TSPAN3O60637 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.64■■□□□ 1.05
TSPAN3O60637 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
TSPAN3O60637 KRT16P2-201ENST00000414673 1423 ntBASIC21.63■■□□□ 1.05
TSPAN3O60637 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TSPAN3O60637 NCF1B-203ENST00000435988 1254 ntBASIC21.63■■□□□ 1.05
TSPAN3O60637 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN3O60637 AL109923.1-201ENST00000618799 583 ntBASIC21.63■■□□□ 1.05
TSPAN3O60637 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.63■■□□□ 1.05
TSPAN3O60637 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN3O60637 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.63■■□□□ 1.05
TSPAN3O60637 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN3O60637 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TSPAN3O60637 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.63■■□□□ 1.05
TSPAN3O60637 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TSPAN3O60637 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN3O60637 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.62■■□□□ 1.05
TSPAN3O60637 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.62■■□□□ 1.05
TSPAN3O60637 AC104771.1-201ENST00000603335 964 ntBASIC21.62■■□□□ 1.05
TSPAN3O60637 AC013268.1-206ENST00000638368 961 ntBASIC21.62■■□□□ 1.05
TSPAN3O60637 AC112229.1-201ENST00000639295 961 ntBASIC21.62■■□□□ 1.05
TSPAN3O60637 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TSPAN3O60637 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.61■■□□□ 1.05
TSPAN3O60637 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.61■■□□□ 1.05
TSPAN3O60637 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.61■■□□□ 1.05
TSPAN3O60637 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TSPAN3O60637 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
TSPAN3O60637 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.61■■□□□ 1.05
TSPAN3O60637 AC083906.2-201ENST00000511578 360 ntBASIC21.61■■□□□ 1.05
TSPAN3O60637 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
TSPAN3O60637 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TSPAN3O60637 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TSPAN3O60637 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TSPAN3O60637 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN3O60637 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN3O60637 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TSPAN3O60637 GPX1P1-201ENST00000388829 606 ntBASIC21.6■■□□□ 1.05
TSPAN3O60637 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN3O60637 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TSPAN3O60637 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.6■■□□□ 1.05
TSPAN3O60637 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TSPAN3O60637 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.59■■□□□ 1.05
TSPAN3O60637 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.59■■□□□ 1.05
TSPAN3O60637 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.59■■□□□ 1.05
TSPAN3O60637 AC068338.2-201ENST00000563278 1430 ntBASIC21.59■■□□□ 1.05
TSPAN3O60637 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.59■■□□□ 1.05
TSPAN3O60637 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TSPAN3O60637 AL121832.2-201ENST00000610979 668 ntBASIC21.59■■□□□ 1.05
TSPAN3O60637 RBM17P2-201ENST00000616397 1405 ntBASIC21.59■■□□□ 1.05
TSPAN3O60637 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.59■■□□□ 1.05
TSPAN3O60637 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.59■■□□□ 1.05
TSPAN3O60637 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TSPAN3O60637 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TSPAN3O60637 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.59■■□□□ 1.05
TSPAN3O60637 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TSPAN3O60637 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TSPAN3O60637 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms