Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL13O43927 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL13O43927 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.81■□□□□ 0.6
CXCL13O43927 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CXCL13O43927 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CXCL13O43927 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.8■□□□□ 0.6
CXCL13O43927 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL13O43927 RARRES2P11-201ENST00000635158 484 ntBASIC18.8■□□□□ 0.6
CXCL13O43927 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CXCL13O43927 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL13O43927 KRT16P2-201ENST00000414673 1423 ntBASIC18.8■□□□□ 0.6
CXCL13O43927 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL13O43927 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL13O43927 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
CXCL13O43927 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.79■□□□□ 0.6
CXCL13O43927 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 SLC7A5P1-201ENST00000568957 537 ntBASIC18.79■□□□□ 0.6
CXCL13O43927 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.79■□□□□ 0.6
CXCL13O43927 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 AC073111.5-205ENST00000641717 521 ntBASIC18.79■□□□□ 0.6
CXCL13O43927 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 AC244015.2-201ENST00000616358 1861 ntBASIC18.79■□□□□ 0.6
CXCL13O43927 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CXCL13O43927 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL13O43927 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCL13O43927 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.78■□□□□ 0.6
CXCL13O43927 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.78■□□□□ 0.6
CXCL13O43927 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.78■□□□□ 0.6
CXCL13O43927 AC010536.3-201ENST00000620306 533 ntBASIC18.78■□□□□ 0.6
CXCL13O43927 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CXCL13O43927 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
CXCL13O43927 LINC00565-201ENST00000562710 2331 ntBASIC18.78■□□□□ 0.6
CXCL13O43927 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL13O43927 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CXCL13O43927 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CXCL13O43927 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.77■□□□□ 0.6
CXCL13O43927 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CXCL13O43927 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CXCL13O43927 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL13O43927 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL13O43927 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCL13O43927 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
CXCL13O43927 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL13O43927 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CXCL13O43927 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL13O43927 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.76■□□□□ 0.59
CXCL13O43927 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL13O43927 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL13O43927 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL13O43927 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CXCL13O43927 CDCA4P2-201ENST00000441182 718 ntBASIC18.76■□□□□ 0.59
CXCL13O43927 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms