Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDE6DO43924 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PDE6DO43924 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PDE6DO43924 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PDE6DO43924 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PDE6DO43924 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PDE6DO43924 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDE6DO43924 AC139795.1-202ENST00000500444 432 ntBASIC16.24■□□□□ 0.19
PDE6DO43924 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC16.24■□□□□ 0.19
PDE6DO43924 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.24■□□□□ 0.19
PDE6DO43924 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PDE6DO43924 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.24■□□□□ 0.19
PDE6DO43924 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PDE6DO43924 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PDE6DO43924 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDE6DO43924 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PDE6DO43924 AC027702.1-201ENST00000563810 1770 ntBASIC16.23■□□□□ 0.19
PDE6DO43924 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6DO43924 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6DO43924 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.23■□□□□ 0.19
PDE6DO43924 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6DO43924 PLK5-205ENST00000642079 1969 ntBASIC16.23■□□□□ 0.19
PDE6DO43924 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PDE6DO43924 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.23■□□□□ 0.19
PDE6DO43924 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.22■□□□□ 0.19
PDE6DO43924 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PDE6DO43924 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC16.22■□□□□ 0.19
PDE6DO43924 MIR7108-201ENST00000614319 87 ntBASIC16.22■□□□□ 0.19
PDE6DO43924 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDE6DO43924 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PDE6DO43924 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6DO43924 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6DO43924 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.21■□□□□ 0.19
PDE6DO43924 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6DO43924 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PDE6DO43924 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PDE6DO43924 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6DO43924 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDE6DO43924 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PDE6DO43924 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.21■□□□□ 0.19
PDE6DO43924 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.21■□□□□ 0.18
PDE6DO43924 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6DO43924 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.21■□□□□ 0.18
PDE6DO43924 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDE6DO43924 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.21■□□□□ 0.18
PDE6DO43924 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.2■□□□□ 0.18
PDE6DO43924 RNF126P1-201ENST00000567452 1320 ntBASIC16.2■□□□□ 0.18
PDE6DO43924 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6DO43924 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDE6DO43924 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.2■□□□□ 0.18
PDE6DO43924 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDE6DO43924 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms